Literature DB >> 9007635

The validation of a 7-locus multiplex STR test for use in forensic casework. (II), Artefacts, casework studies and success rates.

R Sparkes1, C Kimpton, S Gilbard, P Carne, J Andersen, N Oldroyd, D Thomas, A Urquhart, P Gill.   

Abstract

PCR-based DNA typing of biological evidence is now widely used in forensic analyses due to the obvious advantages of enhanced sensitivity, the ability to distinguish discrete alleles and efficacy with degraded samples. A multiplex short tandem repeat (STR) system has been previously developed which successfully co-amplifies six STR loci HUMTH01, D21S11, D18S51, D8S1179, HUMVWF31/A and HUMFIBRA (FGA) in conjunction with the X-Y homologous gene Amelogenin. This is known as the second generation multiplex system (SGM). Detection of the PCR products is undertaken on ABD 373A or 377 automated sequencers using denaturing polyacrylamide gels coupled with fluorescent-based technology. We have evaluated this system for routine forensic use and demonstrated that the technique is robust and reproducible under conditions consistent with those encountered in a forensic environment. A total of 132 stains from simulated and actual casework were analysed, together with relevant control areas and reference samples. The success rate was high with 76% of stains giving full profiles; we were also able to successfully detect and interpret mixtures. No mistyping was observed. A detailed examination of each of these profiles has assisted in the development of guidelines for casework interpretation. Although artefacts, stutter peaks and undenatured DNA were occasionally observed, these did not interfere with the accuracy of interpretation. In addition 38 samples, previously examined using the quadruplex system, were analysed with the SGM to enable a direct comparison to be made between the systems. The performance of the system with poor quality samples demonstrated its use as a rapid and powerful technique for individual identification.

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Year:  1996        PMID: 9007635     DOI: 10.1007/BF01225518

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  10 in total

1.  DNA extraction from mixtures of body fluid using mild preferential lysis.

Authors:  P Wiegand; M Schürenkamp; U Schütte
Journal:  Int J Legal Med       Date:  1992       Impact factor: 2.686

2.  Validation studies on the analysis of the HLA DQ alpha locus using the polymerase chain reaction.

Authors:  C T Comey; B Budowle
Journal:  J Forensic Sci       Date:  1991-11       Impact factor: 1.832

3.  A guide to interpreting single locus profiles of DNA mixtures in forensic cases.

Authors:  I W Evett; C Buffery; G Willott; D Stoney
Journal:  J Forensic Sci Soc       Date:  1991 Jan-Mar

4.  Further validation of a multiplex STR system for use in routine forensic identity testing.

Authors:  J F Andersen; M J Greenhalgh; H R Butler; S R Kilpatrick; R C Piercy; K A Way; H S Myhill; J C Wright; R Hallet; B H Parkin
Journal:  Forensic Sci Int       Date:  1996-03-05       Impact factor: 2.395

5.  Validation of the Applied Biosystems Prism 377 automated sequencer for the forensic short tandem repeat analysis.

Authors:  R R Frazier; E S Millican; S K Watson; N J Oldroyd; R L Sparkles; K M Taylor; S Panchal; L Bark; C P Kimpton; P D Gill
Journal:  Electrophoresis       Date:  1996-10       Impact factor: 3.535

6.  The validation of a 7-locus multiplex STR test for use in forensic casework. (II), Artefacts, casework studies and success rates.

Authors:  R Sparkes; C Kimpton; S Gilbard; P Carne; J Andersen; N Oldroyd; D Thomas; A Urquhart; P Gill
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

7.  Correction of some genotyping errors in automated fluorescent microsatellite analysis by enzymatic removal of one base overhangs.

Authors:  F Ginot; I Bordelais; S Nguyen; G Gyapay
Journal:  Nucleic Acids Res       Date:  1996-02-01       Impact factor: 16.971

8.  Approach to genotyping errors caused by nontemplated nucleotide addition by Taq DNA polymerase.

Authors:  J R Smith; J D Carpten; M J Brownstein; S Ghosh; V L Magnuson; D A Gilbert; J M Trent; F S Collins
Journal:  Genome Res       Date:  1995-10       Impact factor: 9.043

9.  The validation of short tandem repeat (STR) loci for use in forensic casework.

Authors:  J E Lygo; P E Johnson; D J Holdaway; S Woodroffe; J P Whitaker; T M Clayton; C P Kimpton; P Gill
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

10.  Forensic application of DNA 'fingerprints'.

Authors:  P Gill; A J Jeffreys; D J Werrett
Journal:  Nature       Date:  1985 Dec 12-18       Impact factor: 49.962

  10 in total
  9 in total

1.  Rare failures in the amelogenin sex test.

Authors:  M Steinlechner; B Berger; H Niederstätter; W Parson
Journal:  Int J Legal Med       Date:  2002-04       Impact factor: 2.686

2.  The GEDNAP blind trial concept part II. Trends and developments.

Authors:  S Rand; M Schürenkamp; C Hohoff; B Brinkmann
Journal:  Int J Legal Med       Date:  2004-01-31       Impact factor: 2.686

3.  Development of the AmpFISTR SEfiler PCR amplification kit: a new multiplex containing the highly discriminating ACTBP2 (SE33) locus.

Authors:  Sulekha Rao Coticone; Nicola Oldroyd; Heidi Philips; Paul Foxall
Journal:  Int J Legal Med       Date:  2004-05-15       Impact factor: 2.686

4.  Unusual variant alleles in commonly used short tandem repeat loci.

Authors:  P Grubwieser; R Mühlmann; H Niederstätter; M Pavlic; W Parson
Journal:  Int J Legal Med       Date:  2005-01-05       Impact factor: 2.686

5.  DNA mixtures: biostatistics for mixed stains with haplotypic genetic markers.

Authors:  N Fukshansky; W Bär
Journal:  Int J Legal Med       Date:  2005-02-17       Impact factor: 2.686

6.  Development of new PCR multiplex system by the simultaneous detection of 10 miniSTRs, SE33, Penta E, Penta D, and four Y-STRs.

Authors:  Muhammad Shafique; Muhammad Saqib Shahzad; Ziaur Rahman; Muhammad Adnan Shan; Rukhsana Perveen; Muhammad Shahzad; Manzoor Hussain; Ahmad Ali Shahid; Tayyab Husnain
Journal:  Int J Legal Med       Date:  2016-05-11       Impact factor: 2.686

7.  The validation of a 7-locus multiplex STR test for use in forensic casework. (II), Artefacts, casework studies and success rates.

Authors:  R Sparkes; C Kimpton; S Gilbard; P Carne; J Andersen; N Oldroyd; D Thomas; A Urquhart; P Gill
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

8.  The validation of a 7-locus multiplex STR test for use in forensic casework. (I). Mixtures, ageing, degradation and species studies.

Authors:  R Sparkes; C Kimpton; S Watson; N Oldroyd; T Clayton; L Barnett; J Arnold; C Thompson; R Hale; J Chapman; A Urquhart; P Gill
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

Review 9.  Animal Forensic Genetics.

Authors:  Adrian Linacre
Journal:  Genes (Basel)       Date:  2021-04-01       Impact factor: 4.096

  9 in total

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