Literature DB >> 9003621

A Mycobacterium tuberculosis IS6110 preferential locus (ipl) for insertion into the genome.

Z Fang1, K J Forbes.   

Abstract

A 267-nucleotide Mycobacterium tuberculosis genomic sequence (ipl, the IS6110 preferential locus) which can harbor the insertion sequence IS6110 at six alternative locations has been identified in some three-quarters of the isolates tested. Only one IS6110 copy was observed at this locus in the ipl::IS6110(+)-containing isolates tested, and all insertions had the same orientation. The implications of this finding for IS6110 fingerprint typing methods is discussed in this work.

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Year:  1997        PMID： 9003621      PMCID： PMC229605          DOI： 10.1128/jcm.35.2.479-481.1997

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  11 in total

1.  Insertion element IS987 from Mycobacterium bovis BCG is located in a hot-spot integration region for insertion elements in Mycobacterium tuberculosis complex strains.

Authors:  P W Hermans; D van Soolingen; E M Bik; P E de Haas; J W Dale; J D van Embden
Journal:  Infect Immun       Date:  1991-08       Impact factor: 3.441

2.  IS6110, an IS-like element of Mycobacterium tuberculosis complex.

Authors:  D Thierry; M D Cave; K D Eisenach; J T Crawford; J H Bates; B Gicquel; J L Guesdon
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

3.  Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

Authors:  J D van Embden; M D Cave; J T Crawford; J W Dale; K D Eisenach; B Gicquel; P Hermans; C Martin; R McAdam; T M Shinnick
Journal:  J Clin Microbiol       Date:  1993-02       Impact factor: 5.948

4.  Genetic analysis of transpositions in the lac region of Escherichia coli.

Authors:  J H Miller; M P Calos; D Galas; M Hofer; D E Büchel; B Müller-Hill
Journal:  J Mol Biol       Date:  1980-11-25       Impact factor: 5.469

5.  DNA polymorphisms in strains of Mycobacterium tuberculosis analyzed by pulsed-field gel electrophoresis: a tool for epidemiology.

Authors:  Y Zhang; G H Mazurek; M D Cave; K D Eisenach; Y Pang; D T Murphy; R J Wallace
Journal:  J Clin Microbiol       Date:  1992-06       Impact factor: 5.948

6.  Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family.

Authors:  R A McAdam; P W Hermans; D van Soolingen; Z F Zainuddin; D Catty; J D van Embden; J W Dale
Journal:  Mol Microbiol       Date:  1990-09       Impact factor: 3.501

7.  Analysis of the regions responsible for IS6110 RFLP in a single Mycobacterium tuberculosis strain.

Authors:  M V Mendiola; C Martín; I Otal; B Gicquel
Journal:  Res Microbiol       Date:  1992-10       Impact factor: 3.992

8.  Insertion element IS986 from Mycobacterium tuberculosis: a useful tool for diagnosis and epidemiology of tuberculosis.

Authors:  P W Hermans; D van Soolingen; J W Dale; A R Schuitema; R A McAdam; D Catty; J D van Embden
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948

9.  An integrated map of the genome of the tubercle bacillus, Mycobacterium tuberculosis H37Rv, and comparison with Mycobacterium leprae.

Authors:  W J Philipp; S Poulet; K Eiglmeier; L Pascopella; V Balasubramanian; B Heym; S Bergh; B R Bloom; W R Jacobs; S T Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-02       Impact factor: 11.205

10.  Population genetics of Mycobacterium tuberculosis complex in Scotland analysed by pulsed-field gel electrophoresis.

Authors:  E S Olson; K J Forbes; B Watt; T H Pennington
Journal:  Epidemiol Infect       Date:  1995-02       Impact factor: 2.451
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  45 in total

1.  IS6110 insertions in Mycobacterium tuberculosis: predominantly into coding regions.

Authors:  S Sampson; R Warren; M Richardson; G van der Spuy; P van Helden
Journal:  J Clin Microbiol       Date:  2001-09       Impact factor: 5.948

2.  Comparison of variable number tandem repeat and IS6110-restriction fragment length polymorphism analyses for discrimination of high- and low-copy-number IS6110 Mycobacterium tuberculosis isolates.

Authors:  R E Barlow; D M Gascoyne-Binzi; S H Gillespie; A Dickens; S Qamer; P M Hawkey
Journal:  J Clin Microbiol       Date:  2001-07       Impact factor: 5.948

3.  Implications of low frequency of IS6110 in fingerprinting field isolates of Mycobacterium tuberculosis from Kerala, India.

Authors:  I Radhakrishnan; M Y K; R A Kumar; S Mundayoor
Journal:  J Clin Microbiol       Date:  2001-04       Impact factor: 5.948

4.  Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis.

Authors:  Mårten Kivi; Xuemin Liu; Soumya Raychaudhuri; Russ B Altman; Peter M Small
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

5.  False molecular clusters due to nonrandom association of IS6110 with Mycobacterium tuberculosis.

Authors:  S H Gillespie; A Dickens; T D McHugh
Journal:  J Clin Microbiol       Date:  2000-06       Impact factor: 5.948

6.  PCR-based methodology for detecting multidrug-resistant strains of Mycobacterium tuberculosis Beijing family circulating in Russia.

Authors:  I Mokrousov; T Otten; A Vyazovaya; E Limeschenko; M L Filipenko; C Sola; N Rastogi; L Steklova; B Vyshnevskiy; O Narvskaya
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2003-06-03       Impact factor: 3.267

7.  IS6110-mediated deletion polymorphism in isogenic strains of Mycobacterium tuberculosis.

Authors:  S L Sampson; M Richardson; P D Van Helden; R M Warren
Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948

8.  Progression toward an improved DNA amplification-based typing technique in the study of Mycobacterium tuberculosis epidemiology.

Authors:  Krishna K Gopaul; Timothy J Brown; Andrea L Gibson; Malcolm D Yates; Francis A Drobniewski
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

9.  IS6110 transposition and evolutionary scenario of the direct repeat locus in a group of closely related Mycobacterium tuberculosis strains.

Authors:  Z Fang; N Morrison; B Watt; C Doig; K J Forbes
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

10.  Role of large sequence polymorphisms (LSPs) in generating genomic diversity among clinical isolates of Mycobacterium tuberculosis and the utility of LSPs in phylogenetic analysis.

Authors:  David Alland; David W Lacher; Manzour Hernando Hazbón; Alifiya S Motiwala; Weihong Qi; Robert D Fleischmann; Thomas S Whittam
Journal:  J Clin Microbiol       Date:  2006-11-01       Impact factor: 5.948
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