Literature DB >> 1981088

Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family.

R A McAdam1, P W Hermans, D van Soolingen, Z F Zainuddin, D Catty, J D van Embden, J W Dale.   

Abstract

A repetitive element (IS986), previously isolated from Mycobacterium tuberculosis and shown to detect multiple restriction fragment-length polymorphisms (RFLPs), has been sequenced. It consists of a potential insertion sequence of 1358bp, with 30-bp inverted repeat ends. IS986 has four potentially significant open reading frames (ORFs): ORFa1, ORFa2 and ORFb on one strand and ORFc on the complementary strand. The sequences of the potential translated products identify IS986 as a member of the IS3 family, with an apparent frameshift between ORFa1 and ORFa2. IS986 has potential as a highly specific probe for detection and typing of M. tuberculosis, as well as for transposon mutagenesis of mycobacteria. The sequence of IS986 is virtually identical to that of another recently described element, IS6110 (Thierry et al., 1990).

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Year:  1990        PMID: 1981088     DOI: 10.1111/j.1365-2958.1990.tb02073.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  70 in total

1.  Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis.

Authors:  Mårten Kivi; Xuemin Liu; Soumya Raychaudhuri; Russ B Altman; Peter M Small
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

2.  A genetic mechanism for deletion of the ser2 gene cluster and formation of rough morphological variants of Mycobacterium avium.

Authors:  T M Eckstein; J M Inamine; M L Lambert; J T Belisle
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

3.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

4.  Absence of the genetic marker IS6110 from a strain of Mycobacterium tuberculosis isolated in Ontario.

Authors:  S T Howard; M T Oughton; A Haddad; W M Johnson
Journal:  Can J Infect Dis       Date:  1998-01

5.  Molecular cloning of a highly repeated DNA element from Mycobacterium tuberculosis and its use as an epidemiological tool.

Authors:  B C Ross; K Raios; K Jackson; B Dwyer
Journal:  J Clin Microbiol       Date:  1992-04       Impact factor: 5.948

6.  Comparison of random amplified polymorphic DNA with restriction fragment length polymorphism as epidemiological typing methods for Mycobacterium tuberculosis.

Authors:  C J Linton; A D Smart; J P Leeming; H Jalal; A Telenti; T Bodmer; M R Millar
Journal:  Clin Mol Pathol       Date:  1995-06

7.  Insertion element IS987 from Mycobacterium bovis BCG is located in a hot-spot integration region for insertion elements in Mycobacterium tuberculosis complex strains.

Authors:  P W Hermans; D van Soolingen; E M Bik; P E de Haas; J W Dale; J D van Embden
Journal:  Infect Immun       Date:  1991-08       Impact factor: 3.441

8.  Detection of Mycobacterium tuberculosis in clinical specimens by polymerase chain reaction and Gen-Probe Amplified Mycobacterium Tuberculosis Direct Test.

Authors:  C Abe; K Hirano; M Wada; Y Kazumi; M Takahashi; Y Fukasawa; T Yoshimura; C Miyagi; S Goto
Journal:  J Clin Microbiol       Date:  1993-12       Impact factor: 5.948

9.  A more reliable PCR for detection of Mycobacterium tuberculosis in clinical samples.

Authors:  L F Kox; D Rhienthong; A M Miranda; N Udomsantisuk; K Ellis; J van Leeuwen; S van Heusden; S Kuijper; A H Kolk
Journal:  J Clin Microbiol       Date:  1994-03       Impact factor: 5.948

10.  Characterization of the katG gene encoding a catalase-peroxidase required for the isoniazid susceptibility of Mycobacterium tuberculosis.

Authors:  B Heym; Y Zhang; S Poulet; D Young; S T Cole
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

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