Literature DB >> 8381814

Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology.

J D van Embden1, M D Cave, J T Crawford, J W Dale, K D Eisenach, B Gicquel, P Hermans, C Martin, R McAdam, T M Shinnick.   

Abstract

DNA fingerprinting of Mycobacterium tuberculosis has been shown to be a powerful epidemiologic tool. We propose a standardized technique which exploits variability in both the number and genomic position of IS6110 to generate strain-specific patterns. General use of this technique will permit comparison of results between different laboratories. Such comparisons will facilitate investigations into the international transmission of tuberculosis and may identify specific strains with unique properties such as high infectivity, virulence, or drug resistance.

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Year:  1993        PMID: 8381814      PMCID: PMC262774          DOI: 10.1128/jcm.31.2.406-409.1993

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  14 in total

1.  Use of gene probes based on the insertion sequence IS986 to differentiate between BCG vaccine strains.

Authors:  N G Fomukong; J W Dale; T W Osborn; J M Grange
Journal:  J Appl Bacteriol       Date:  1992-02

2.  IS6110, an IS-like element of Mycobacterium tuberculosis complex.

Authors:  D Thierry; M D Cave; K D Eisenach; J T Crawford; J H Bates; B Gicquel; J L Guesdon
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

3.  Chromosomal DNA fingerprint patterns produced with IS6110 as strain-specific markers for epidemiologic study of tuberculosis.

Authors:  G H Mazurek; M D Cave; K D Eisenach; R J Wallace; J H Bates; J T Crawford
Journal:  J Clin Microbiol       Date:  1991-09       Impact factor: 5.948

4.  Polymorphic repetitive DNA sequences in Mycobacterium tuberculosis detected with a gene probe from a Mycobacterium fortuitum plasmid.

Authors:  Z F Zainuddin; J W Dale
Journal:  J Gen Microbiol       Date:  1989-09

5.  IS6110: conservation of sequence in the Mycobacterium tuberculosis complex and its utilization in DNA fingerprinting.

Authors:  M D Cave; K D Eisenach; P F McDermott; J H Bates; J T Crawford
Journal:  Mol Cell Probes       Date:  1991-02       Impact factor: 2.365

6.  Characterization of a Mycobacterium tuberculosis insertion sequence, IS6110, and its application in diagnosis.

Authors:  D Thierry; A Brisson-Noël; V Vincent-Lévy-Frébault; S Nguyen; J L Guesdon; B Gicquel
Journal:  J Clin Microbiol       Date:  1990-12       Impact factor: 5.948

7.  Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family.

Authors:  R A McAdam; P W Hermans; D van Soolingen; Z F Zainuddin; D Catty; J D van Embden; J W Dale
Journal:  Mol Microbiol       Date:  1990-09       Impact factor: 3.501

8.  An outbreak of multidrug-resistant tuberculosis among hospitalized patients with the acquired immunodeficiency syndrome.

Authors:  B R Edlin; J I Tokars; M H Grieco; J T Crawford; J Williams; E M Sordillo; K R Ong; J O Kilburn; S W Dooley; K G Castro
Journal:  N Engl J Med       Date:  1992-06-04       Impact factor: 91.245

9.  Repetitive DNA sequences as probes for Mycobacterium tuberculosis.

Authors:  K D Eisenach; J T Crawford; J H Bates
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

10.  Insertion element IS986 from Mycobacterium tuberculosis: a useful tool for diagnosis and epidemiology of tuberculosis.

Authors:  P W Hermans; D van Soolingen; J W Dale; A R Schuitema; R A McAdam; D Catty; J D van Embden
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948

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  926 in total

1.  Discrimination of multidrug-resistant Mycobacterium tuberculosis IS6110 fingerprint subclusters by rpoB gene mutation analysis.

Authors:  I Portugal; S Maia; J Moniz-Pereira
Journal:  J Clin Microbiol       Date:  1999-09       Impact factor: 5.948

Review 2.  Genetic fingerprinting in the study of tuberculosis transmission.

Authors:  S Kulaga; M A Behr; K Schwartzman
Journal:  CMAJ       Date:  1999-11-02       Impact factor: 8.262

3.  Analysis for a limited number of gene codons can predict drug resistance of Mycobacterium tuberculosis in a high-incidence community.

Authors:  A Van Rie ; R Warren; I Mshanga; A M Jordaan; G D van der Spuy ; M Richardson; J Simpson; R P Gie; D A Enarson; N Beyers; P D van Helden ; T C Victor
Journal:  J Clin Microbiol       Date:  2001-02       Impact factor: 5.948

4.  Rapid identification of laboratory contamination with Mycobacterium tuberculosis using variable number tandem repeat analysis.

Authors:  D M Gascoyne-Binzi; R E Barlow; R Frothingham; G Robinson; T A Collyns; R Gelletlie; P M Hawkey
Journal:  J Clin Microbiol       Date:  2001-01       Impact factor: 5.948

5.  Molecular epidemiology of Mycobacterium tuberculosis in Norway.

Authors:  U R Dahle; P Sandven; E Heldal; D A Caugant
Journal:  J Clin Microbiol       Date:  2001-05       Impact factor: 5.948

Review 6.  Amplified-fragment length polymorphism analysis: the state of an art.

Authors:  P H Savelkoul; H J Aarts; J de Haas; L Dijkshoorn; B Duim; M Otsen; J L Rademaker; L Schouls; J A Lenstra
Journal:  J Clin Microbiol       Date:  1999-10       Impact factor: 5.948

7.  Study of restriction fragment length polymorphism analysis and spoligotyping for epidemiological investigation of Mycobacterium bovis infection.

Authors:  E Costello; D O'Grady; O Flynn; R O'Brien; M Rogers; F Quigley; J Egan; J Griffin
Journal:  J Clin Microbiol       Date:  1999-10       Impact factor: 5.948

8.  pncA mutations in pyrazinamide-resistant Mycobacterium tuberculosis isolates from northwestern Russia.

Authors:  H J Marttila; M Marjamäki; E Vyshnevskaya; B I Vyshnevskiy; T F Otten; A V Vasilyef; M K Viljanen
Journal:  Antimicrob Agents Chemother       Date:  1999-07       Impact factor: 5.191

9.  Detection of rifampin resistance in Mycobacterium tuberculosis by double gradient-denaturing gradient gel electrophoresis.

Authors:  P Scarpellini; S Braglia; P Carrera; M Cedri; P Cichero; A Colombo; R Crucianelli; A Gori; M Ferrari; A Lazzarin
Journal:  Antimicrob Agents Chemother       Date:  1999-10       Impact factor: 5.191

Review 10.  How molecular epidemiology has changed what we know about tuberculosis.

Authors:  M Kato-Maeda; P M Small
Journal:  West J Med       Date:  2000-04
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