Literature DB >> 8897601

Surface point mutations that significantly alter the structure and stability of a protein's denatured state.

C K Smith1, Z Bu, K S Anderson, J M Sturtevant, D M Engelman, L Regan.   

Abstract

Significantly different m values (1.9-2.7 kcal mol-1 M-1) were observed for point mutations at a single, solvent-exposed site (T53) in a variant of the B1 domain of streptococcal Protein G using guanidine hydrochloride (GuHCl) as a denaturant. This report focuses on elucidating the energetic and structural implications of these m-value differences in two Protein G mutants, containing Ala and Thr at position 53. These two proteins are representative of the high (m+) and low (m-) m-value mutants studied. Differential scanning calorimetry revealed no evidence of equilibrium intermediates. A comparison of GuHCl denaturation monitored by fluorescence and circular dichroism showed that secondary and tertiary structure denatured concomitantly. The rates of folding (286 S-1 for the m+ mutant and 952 S-1 for the m- mutant) and the rates of unfolding (11 S-1 for m+ mutant and 3 S-1 for the m- mutant) were significantly different, as determined by stopped-flow fluorescence. The relative solvation free energies of the transition states were identical for the two proteins (alpha ++ = 0.3). Small-angle X-ray scattering showed that the radius of gyration of the denatured state (Rgd) of the m+ mutant did not change with increasing denaturant concentrations (Rgd approximately 23 A); whereas, the Rgd of the m- mutant increased from approximately 17 A to 23 A with increasing denaturant concentration. The results indicate that the mutations exert significant effects in both the native and GuHCl-induced denatured state of these two proteins.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8897601      PMCID: PMC2143264          DOI: 10.1002/pro.5560051007

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  34 in total

1.  Contributions of the large hydrophobic amino acids to the stability of staphylococcal nuclease.

Authors:  D Shortle; W E Stites; A K Meeker
Journal:  Biochemistry       Date:  1990-09-04       Impact factor: 3.162

2.  A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G.

Authors:  A M Gronenborn; D R Filpula; N Z Essig; A Achari; M Whitlow; P T Wingfield; G M Clore
Journal:  Science       Date:  1991-08-09       Impact factor: 47.728

3.  Residual structure in large fragments of staphylococcal nuclease: effects of amino acid substitutions.

Authors:  D Shortle; A K Meeker
Journal:  Biochemistry       Date:  1989-02-07       Impact factor: 3.162

4.  Mutant sequences as probes of protein folding mechanisms.

Authors:  C R Matthews; M R Hurle
Journal:  Bioessays       Date:  1987-06       Impact factor: 4.345

5.  Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants.

Authors:  M M Santoro; D W Bolen
Journal:  Biochemistry       Date:  1988-10-18       Impact factor: 3.162

6.  Determining globular protein stability: guanidine hydrochloride denaturation of myoglobin.

Authors:  C N Pace; K E Vanderburg
Journal:  Biochemistry       Date:  1979-01-23       Impact factor: 3.162

7.  The methanol-induced globular and expanded denatured states of cytochrome c: a study by CD fluorescence, NMR and small-angle X-ray scattering.

Authors:  Y O Kamatari; T Konno; M Kataoka; K Akasaka
Journal:  J Mol Biol       Date:  1996-06-14       Impact factor: 5.469

8.  An engineered disulfide bond in dihydrofolate reductase.

Authors:  J E Villafranca; E E Howell; S J Oatley; N H Xuong; J Kraut
Journal:  Biochemistry       Date:  1987-04-21       Impact factor: 3.162

9.  Conformational stability and activity of ribonuclease T1 with zero, one, and two intact disulfide bonds.

Authors:  C N Pace; G R Grimsley; J A Thomson; B J Barnett
Journal:  J Biol Chem       Date:  1988-08-25       Impact factor: 5.157

10.  Effects of the phenylalanine-22----leucine, glutamic acid-49----methionine, glycine-234----aspartic acid, and glycine-234----lysine mutations on the folding and stability of the alpha subunit of tryptophan synthase from Escherichia coli.

Authors:  A M Beasty; M R Hurle; J T Manz; T Stackhouse; J J Onuffer; C R Matthews
Journal:  Biochemistry       Date:  1986-05-20       Impact factor: 3.162

View more
  16 in total

1.  NMR and SAXS characterization of the denatured state of the chemotactic protein CheY: implications for protein folding initiation.

Authors:  P Garcia; L Serrano; D Durand; M Rico; M Bruix
Journal:  Protein Sci       Date:  2001-06       Impact factor: 6.725

2.  Amino-acid substitutions at the fully exposed P1 site of bovine pancreatic trypsin inhibitor affect its stability.

Authors:  D Krowarsch; J Otlewski
Journal:  Protein Sci       Date:  2001-04       Impact factor: 6.725

3.  Dramatic acceleration of protein folding by stabilization of a nonnative backbone conformation.

Authors:  Ariel A Di Nardo; Dmitry M Korzhnev; Peter J Stogios; Arash Zarrine-Afsar; Lewis E Kay; Alan R Davidson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

4.  Random-coil behavior and the dimensions of chemically unfolded proteins.

Authors:  Jonathan E Kohn; Ian S Millett; Jaby Jacob; Bojan Zagrovic; Thomas M Dillon; Nikolina Cingel; Robin S Dothager; Soenke Seifert; P Thiyagarajan; Tobin R Sosnick; M Zahid Hasan; Vijay S Pande; Ingo Ruczinski; Sebastian Doniach; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

5.  To fold or expand--a charged question.

Authors:  Jeremy L England; Gilad Haran
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-03       Impact factor: 11.205

6.  Small-angle X-ray scattering and single-molecule FRET spectroscopy produce highly divergent views of the low-denaturant unfolded state.

Authors:  Tae Yeon Yoo; Steve P Meisburger; James Hinshaw; Lois Pollack; Gilad Haran; Tobin R Sosnick; Kevin Plaxco
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

7.  Coil-globule transition in the denatured state of a small protein.

Authors:  Eilon Sherman; Gilad Haran
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-20       Impact factor: 11.205

8.  Electrostatic interactions in the denatured state ensemble: their effect upon protein folding and protein stability.

Authors:  Jae-Hyun Cho; Satoshi Sato; Jia-Cherng Horng; Burcu Anil; Daniel P Raleigh
Journal:  Arch Biochem Biophys       Date:  2007-08-22       Impact factor: 4.013

9.  Folding pathway of the b1 domain of protein G explored by multiscale modeling.

Authors:  Sebastian Kmiecik; Andrzej Kolinski
Journal:  Biophys J       Date:  2007-09-21       Impact factor: 4.033

10.  Synergy between simulation and experiment in describing the energy landscape of protein folding.

Authors:  A G Ladurner; L S Itzhaki; V Daggett; A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.