Literature DB >> 8880680

Generic data modeling for clinical repositories.

S B Johnson1.   

Abstract

OBJECTIVE: To construct a large-scale clinical repository that accurately captures a detailed understanding of the data vital to the process of health care and that provides highly efficient access to patient information for the users of a clinical information system.
DESIGN: Conventional approaches to data modeling encourage the development of a highly specific data schema in order to capture as much information as possible about a given domain. In contrast, current database technology functions most effectively for clinical databases when a generic data schema is used. The technique of "generic data modeling" is presented as a method of reconciling these opposing views of clinical data, using formal operations to transform a detailed schema into a generic one.
RESULTS: A complex schema consisting of hundreds of entities and representing a rich set of constraints about the patient care domain is transformed into a generic schema consisting of roughly two dozen tables. The resulting database design is efficient for patient-oriented queries and is highly flexible in adapting to the changing information needs of a health care institution, particularly changes involving the collection of new data elements.
CONCLUSION: Conventional approaches to data modeling can be used to develop rich, complex models of clinical data that are useful for understanding and managing the process of patient care. Generic data modeling techniques can successfully transform a detailed design into an efficient generic design that is flexible enough to meet the needs of an operational clinical information system.

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Mesh:

Year:  1996        PMID: 8880680      PMCID: PMC116317          DOI: 10.1136/jamia.1996.97035024

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  13 in total

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Authors:  R Linnarsson; O Wigertz
Journal:  Methods Inf Med       Date:  1989-04       Impact factor: 2.176

2.  A schema for representing medical language applied to clinical radiology.

Authors:  C Friedman; J J Cimino; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 May-Jun       Impact factor: 4.497

3.  A logical foundation for representation of clinical data.

Authors:  K E Campbell; A K Das; M A Musen
Journal:  J Am Med Inform Assoc       Date:  1994 May-Jun       Impact factor: 4.497

4.  Experiments in concept modeling for radiographic image reports.

Authors:  D S Bell; E Pattison-Gordon; R A Greenes
Journal:  J Am Med Inform Assoc       Date:  1994 May-Jun       Impact factor: 4.497

5.  Accessing the Columbia Clinical Repository.

Authors:  S B Johnson; G Hripcsak; J Chen; P Clayton
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

6.  A powerful macro-model for the computer patient record.

Authors:  A M van Ginneken; H Stam; J S Duisterhout
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

7.  An information model for medical events.

Authors:  D J Essin; T L Lincoln
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

8.  A high-level object-oriented model for representing relationships in an electronic medical record.

Authors:  R H Dolin
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

9.  A data model that captures clinical reasoning about patient problems.

Authors:  R C Barrows; S B Johnson
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1995

10.  Implementing a low-cost computer-based patient record: a controlled vocabulary reduces data base design complexity.

Authors:  D J Essin; T L Lincoln
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1995
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  35 in total

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Journal:  J Am Med Inform Assoc       Date:  2002 Mar-Apr       Impact factor: 4.497

3.  Managing complex change in clinical study metadata.

Authors:  Cynthia A Brandt; Rohit Gadagkar; Cesar Rodriguez; Prakash M Nadkarni
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7.  Large scale database scrubbing using object oriented software components.

Authors:  R L Herting; M R Barnes
Journal:  Proc AMIA Symp       Date:  1998

8.  A distribution-based method for assessing the differences between clinical trial target populations and patient populations in electronic health records.

Authors:  C Weng; Y Li; P Ryan; Y Zhang; F Liu; J Gao; J T Bigger; G Hripcsak
Journal:  Appl Clin Inform       Date:  2014-05-07       Impact factor: 2.342

9.  A Dimensional Bus model for integrating clinical and research data.

Authors:  Ted D Wade; Richard C Hum; James R Murphy
Journal:  J Am Med Inform Assoc       Date:  2011-08-19       Impact factor: 4.497

10.  Learning Personalized Treatment Rules from Electronic Health Records Using Topic Modeling Feature Extraction.

Authors:  Peng Wu; Tianchen Xu; Yuanjia Wang
Journal:  Proc Int Conf Data Sci Adv Anal       Date:  2020-01-23
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