Literature DB >> 10523526

A comprehensive view of human chromosome 1.

P S White1, E P Sulman, C J Porter, T C Matise.   

Abstract

Comprehensive representations of human chromosomes combining diverse genomic data sets, localizing expressed sequences, and reflecting physical distance are essential for disease gene identification and sequencing efforts. We have developed a method (CompView) for integrating genomic information derived from available cytogenetic, genetic linkage, radiation hybrid, physical, and transcript-based mapping approaches. CompView generates chromosome representations with substantially higher resolution, coverage, and integration than current maps of the human genome. The CompView process was used to build a representation of human chromosome 1, yielding a map with >13,000 unique elements, an effective resolution of 910 kb, and a marker density of 50 kb. CompView creates comprehensive and fully integrated depictions of a chromosome's clinical, biological, and structural information.

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Year:  1999        PMID: 10523526      PMCID: PMC310818          DOI: 10.1101/gr.9.10.978

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  37 in total

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Authors:  J Dausset; H Cann; D Cohen; M Lathrop; J M Lalouel; R White
Journal:  Genomics       Date:  1990-03       Impact factor: 5.736

2.  The Radiation Hybrid Database.

Authors:  P Lijnzaad; C Helgesen; P Rodriguez-Tomé
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

3.  Guidelines for human gene nomenclature (1997). HUGO Nomenclature Committee.

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Journal:  Genomics       Date:  1997-10-15       Impact factor: 5.736

Review 4.  A new dimension for the human genome project: towards comprehensive expression maps.

Authors:  T Strachan; M Abitbol; D Davidson; J S Beckmann
Journal:  Nat Genet       Date:  1997-06       Impact factor: 38.330

Review 5.  The isochore organization of the human genome.

Authors:  G Bernardi
Journal:  Annu Rev Genet       Date:  1989       Impact factor: 16.830

6.  A comprehensive genetic map of the human genome based on 5,264 microsatellites.

Authors:  C Dib; S Fauré; C Fizames; D Samson; N Drouot; A Vignal; P Millasseau; S Marc; J Hazan; E Seboun; M Lathrop; G Gyapay; J Morissette; J Weissenbach
Journal:  Nature       Date:  1996-03-14       Impact factor: 49.962

7.  An STS-based map of the human genome.

Authors:  T J Hudson; L D Stein; S S Gerety; J Ma; A B Castle; J Silva; D K Slonim; R Baptista; L Kruglyak; S H Xu; X Hu; A M Colbert; C Rosenberg; M P Reeve-Daly; S Rozen; L Hui; X Wu; C Vestergaard; K M Wilson; J S Bae; S Maitra; S Ganiatsas; C A Evans; M M DeAngelis; K A Ingalls; R W Nahf; L T Horton; M O Anderson; A J Collymore; W Ye; V Kouyoumjian; I S Zemsteva; J Tam; R Devine; D F Courtney; M T Renaud; H Nguyen; T J O'Connor; C Fizames; S Fauré; G Gyapay; C Dib; J Morissette; J B Orlin; B W Birren; N Goodman; J Weissenbach; T L Hawkins; S Foote; D C Page; E S Lander
Journal:  Science       Date:  1995-12-22       Impact factor: 47.728

8.  Automated construction of genetic linkage maps using an expert system (MultiMap): a human genome linkage map.

Authors:  T C Matise; M Perlin; A Chakravarti
Journal:  Nat Genet       Date:  1994-04       Impact factor: 38.330

9.  GDB: the Human Genome Database.

Authors:  S I Letovsky; R W Cottingham; C J Porter; P W Li
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

10.  A second-generation linkage map of the sheep genome.

Authors:  M J de Gortari; B A Freking; R P Cuthbertson; S M Kappes; J W Keele; R T Stone; K A Leymaster; K G Dodds; A M Crawford; C W Beattie
Journal:  Mamm Genome       Date:  1998-03       Impact factor: 2.957

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  2 in total

1.  Fine mapping of the Schnyder's crystalline corneal dystrophy locus.

Authors:  Veena Theendakara; Gerard Tromp; Helena Kuivaniemi; Peter S White; Seema Panchal; Jennifer Cox; R Scott Winters; Petra Riebeling; Frank Tost; Maria Hoeltzenbein; Timo M Tervo; Wolfram Henn; Elke Denniger; Matthias Krause; Murat Koksal; Sebnem Kargi; Suat H Ugurbas; Terho Latvala; Amanda M Shearman; Jayne S Weiss
Journal:  Hum Genet       Date:  2004-03-19       Impact factor: 4.132

2.  Integrating linkage and radiation hybrid mapping data for bovine chromosome 15.

Authors:  Warren M Snelling; Mathieu Gautier; John W Keele; Timothy P L Smith; Roger T Stone; Gregory P Harhay; Gary L Bennett; Naoya Ihara; Akiko Takasuga; Haruko Takeda; Yoshikazu Sugimoto; André Eggen
Journal:  BMC Genomics       Date:  2004-10-08       Impact factor: 3.969

  2 in total

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