Literature DB >> 8789082

Mechanochemical coupling of the motion of molecular motors to ATP hydrolysis.

R D Astumian1, M Bier.   

Abstract

The typical biochemical paradigm for coupling between hydrolysis of ATP and the performance of chemical or mechanical work involves a well-defined sequence of events (a kinetic mechanism) with a fixed stoichiometry between the number of ATP molecules hydrolyzed and the turnover of the output reaction. Recent experiments show, however, that such a deterministic picture of coupling may not be adequate to explain observed behavior of molecular motor proteins in the presence of applied forces. Here we present a general model in which the binding of ATP and release of ADP serve to modulate the binding energy of a motor protein as it travels along a biopolymer backbone. The mechanism is loosely coupled--the average number of ATPs hydrolyzed to cause a single step from one binding site to the next depends strongly on the magnitude of an applied force and on the effective viscous drag force. The statistical mechanical perspective described here offers insight into how local anisotrophy along the "track" for a molecular motor, combined with an energy-releasing chemical reaction to provide a source of nonequilibrium fluctuations, can lead to macroscopic motion.

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Year:  1996        PMID: 8789082      PMCID: PMC1224965          DOI: 10.1016/S0006-3495(96)79605-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

1.  The kinesin-like ncd protein of Drosophila is a minus end-directed microtubule motor.

Authors:  H B McDonald; R J Stewart; L S Goldstein
Journal:  Cell       Date:  1990-12-21       Impact factor: 41.582

2.  Fluctuation driven ratchets: Molecular motors.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-03-14       Impact factor: 9.161

3.  Activation of Na+ and K+ pumping modes of (Na,K)-ATPase by an oscillating electric field.

Authors:  D S Liu; R D Astumian; T Y Tsong
Journal:  J Biol Chem       Date:  1990-05-05       Impact factor: 5.157

Review 4.  Protein motors and Maxwell's demons: does mechanochemical transduction involve a thermal ratchet?

Authors:  R D Vale; F Oosawa
Journal:  Adv Biophys       Date:  1990

5.  The Drosophila claret segregation protein is a minus-end directed motor molecule.

Authors:  R A Walker; E D Salmon; S A Endow
Journal:  Nature       Date:  1990-10-25       Impact factor: 49.962

6.  Movement of microtubules by single kinesin molecules.

Authors:  J Howard; A J Hudspeth; R D Vale
Journal:  Nature       Date:  1989-11-09       Impact factor: 49.962

7.  Can free energy be transduced from electric noise?

Authors:  R D Astumian; P B Chock; T Y Tsong; Y D Chen; H V Westerhoff
Journal:  Proc Natl Acad Sci U S A       Date:  1987-01       Impact factor: 11.205

8.  Direct observation of kinesin stepping by optical trapping interferometry.

Authors:  K Svoboda; C F Schmidt; B J Schnapp; S M Block
Journal:  Nature       Date:  1993-10-21       Impact factor: 49.962

9.  Visualization of single molecules of RNA polymerase sliding along DNA.

Authors:  H Kabata; O Kurosawa; I Arai; M Washizu; S A Margarson; R E Glass; N Shimamoto
Journal:  Science       Date:  1993-12-03       Impact factor: 47.728

10.  Recognition and processing of randomly fluctuating electric signals by Na,K-ATPase.

Authors:  T D Xie; P Marszalek; Y D Chen; T Y Tsong
Journal:  Biophys J       Date:  1994-09       Impact factor: 4.033

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  31 in total

1.  Properties of the stochastic energization-relaxation channel model for vectorial ion transport.

Authors:  E Muneyuki; T A Fukami
Journal:  Biophys J       Date:  2000-03       Impact factor: 4.033

2.  The mechanochemistry of molecular motors.

Authors:  D Keller; C Bustamante
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

Review 3.  The role of thermal activation in motion and force generation by molecular motors.

Authors:  R D Astumian
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-04-29       Impact factor: 6.237

4.  A chemically reversible Brownian motor: application to kinesin and Ncd.

Authors:  R D Astumian; I Derényi
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

5.  Protein-protein ratchets: stochastic simulation and application to processive enzymes.

Authors:  C J Brokaw
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

6.  DNA transport by a micromachined Brownian ratchet device.

Authors:  J S Bader; R W Hammond; S A Henck; M W Deem; G A McDermott; J M Bustillo; J W Simpson; G T Mulhern; J M Rothberg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-09       Impact factor: 11.205

7.  Cl(-) concentration dependence of photovoltage generation by halorhodopsin from Halobacterium salinarum.

Authors:  Eiro Muneyuki; Chie Shibazaki; Yoichiro Wada; Manabu Yakushizin; Hiroyuki Ohtani
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

Review 8.  Thermodynamics and kinetics of molecular motors.

Authors:  R Dean Astumian
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

Review 9.  Artificial Molecular Machines.

Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

10.  Comparison of efficiency of translation between a deformable swimmer versus a rigid body in a bounded fluid domain: consequences for subcellular transport.

Authors:  José S González-García; Joaquín Delgado
Journal:  J Biol Phys       Date:  2006-10       Impact factor: 1.365

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