Literature DB >> 10557291

DNA transport by a micromachined Brownian ratchet device.

J S Bader1, R W Hammond, S A Henck, M W Deem, G A McDermott, J M Bustillo, J W Simpson, G T Mulhern, J M Rothberg.   

Abstract

We have micromachined a silicon-chip device that transports DNA with a Brownian ratchet that rectifies the Brownian motion of microscopic particles. Transport properties for a DNA 50-mer agree with theoretical predictions, and the DNA diffusion constant agrees with previous experiments. This type of micromachine could provide a generic pump or separation component for DNA or other charged species as part of a microscale lab-on-a-chip. A device with reduced feature size could produce a size-based separation of DNA molecules, with applications including the detection of single-nucleotide polymorphisms.

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Year:  1999        PMID: 10557291      PMCID: PMC23918          DOI: 10.1073/pnas.96.23.13165

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

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Journal:  Phys Rev Lett       Date:  1996-02-12       Impact factor: 9.161

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Journal:  Phys Rev Lett       Date:  1994-03-14       Impact factor: 9.161

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Journal:  Science       Date:  1996-09-13       Impact factor: 47.728

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Journal:  Nature       Date:  1989-11-09       Impact factor: 49.962

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Authors:  J Rousselet; L Salome; A Ajdari; J Prost
Journal:  Nature       Date:  1994-08-11       Impact factor: 49.962

9.  Brownian ratchets: molecular separations in lipid bilayers supported on patterned arrays.

Authors:  A van Oudenaarden; S G Boxer
Journal:  Science       Date:  1999-08-13       Impact factor: 47.728

10.  Mechanochemical coupling of the motion of molecular motors to ATP hydrolysis.

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  15 in total

1.  A coarse-grained model for a nanometer-scale molecular pump.

Authors:  Oded Hod; Eran Rabani
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-25       Impact factor: 11.205

2.  Organic electronic ratchets doing work.

Authors:  Erik M Roeling; Wijnand Chr Germs; Barry Smalbrugge; Erik Jan Geluk; Tjibbe de Vries; René A J Janssen; Martijn Kemerink
Journal:  Nat Mater       Date:  2011-01       Impact factor: 43.841

3.  Translocation of a granular chain in a horizontally vibrated saw-tooth channel.

Authors:  Fariba Mortazavi; Mehdi Habibi; Ehsan Nedaaee Oskoee
Journal:  Eur Phys J E Soft Matter       Date:  2016-10-21       Impact factor: 1.890

Review 4.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

5.  Ratchet rectification effect on the translocation of a flexible polyelectrolyte chain.

Authors:  Debasish Mondal; M Muthukumar
Journal:  J Chem Phys       Date:  2016-08-28       Impact factor: 3.488

6.  Light-responsive organic flashing electron ratchet.

Authors:  Ofer Kedem; Bryan Lau; Mark A Ratner; Emily A Weiss
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

7.  Regulating Brownian fluctuations with tunable microscopic magnetic traps.

Authors:  A Chen; G Vieira; T Henighan; M Howdyshell; J A North; A J Hauser; F Y Yang; M G Poirier; C Jayaprakash; R Sooryakumar
Journal:  Phys Rev Lett       Date:  2011-08-18       Impact factor: 9.161

Review 8.  Brownian ratchet mechanisms of ParA-mediated partitioning.

Authors:  Longhua Hu; Anthony G Vecchiarelli; Kiyoshi Mizuuchi; Keir C Neuman; Jian Liu
Journal:  Plasmid       Date:  2017-05-18       Impact factor: 3.466

9.  Diffusion of DNA molecules in gel at high electric fields.

Authors:  P Pasciak; M J Krawczyk; E Gudowska-Nowak; K Kulakowski
Journal:  J Biol Phys       Date:  2005-12       Impact factor: 1.365

10.  Polymer properties of polythymine as revealed by translational diffusion.

Authors:  Sören Doose; Hannes Barsch; Markus Sauer
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

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