Literature DB >> 8785356

Three-dimensional reconstruction of Macrobdella decora (leech) hemoglobin by cryoelectron microscopy.

F de Haas1, N Biosset, J C Taveau, O Lambert, S N Vinogradov, J N Lamy.   

Abstract

Macrobdella decora hemoglobin was observed in vitreous ice by cryoelectron microscopy and subjected to three-dimensional reconstruction by the method of random conical tilt series. The refined volume has a resolution of 40 A and a D6 point-group symmetry. Its architecture, with its hexagonal bilayer appearance, resembles those of Lumbricus terrestris (oligochaete) and Eudistylia vancouverii (polychaete). When the reconstruction volume is viewed along its sixfold axis, the vertices of the upper hexagonal layer are rotated 16 degrees clockwise compared to those of the lower layer. In agreement with the "bracelet" model of Vinogradov et al., a central linker complex is decorated by 12 hollow globular substructures. The linker complex is made up of a central hexagonal toroid linked by 12 c5 connections to two bracelets of c3 connections, which are themselves linked via six c4 connections. The portion of the hollow globular substructure corresponding to the dodecamer of globin chains has a local pseudo threefold symmetry and is composed of three elongated structures visible when the volume is displayed at high threshold. The main difference between Macrobdella, Lumbricus, and Eudistylia hemoglobins is the presence in Macrobdella of a central hexagonal toroid instead of a compact flat hexagonal structure.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8785356      PMCID: PMC1225166          DOI: 10.1016/S0006-3495(96)79762-X

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

Review 1.  Assembly of multisubunit respiratory proteins.

Authors:  E Antonini; E Chiancone
Journal:  Annu Rev Biophys Bioeng       Date:  1977

2.  Angular reconstitution: a posteriori assignment of projection directions for 3D reconstruction.

Authors:  M Van Heel
Journal:  Ultramicroscopy       Date:  1987       Impact factor: 2.689

3.  A dodecamer of globin chains is the principal functional subunit of the extracellular hemoglobin of Lumbricus terrestris.

Authors:  S N Vinogradov; P K Sharma; A N Qabar; J S Wall; J A Westrick; J H Simmons; S J Gill
Journal:  J Biol Chem       Date:  1991-07-15       Impact factor: 5.157

Review 4.  Cryo-electron microscopy of vitrified specimens.

Authors:  J Dubochet; M Adrian; J J Chang; J C Homo; J Lepault; A W McDowall; P Schultz
Journal:  Q Rev Biophys       Date:  1988-05       Impact factor: 5.318

Review 5.  Three-dimensional reconstruction of single particles from random and nonrandom tilt series.

Authors:  M Radermacher
Journal:  J Electron Microsc Tech       Date:  1988-08

6.  Molecular shape of Lumbricus terrestris erythrocruorin studied by electron microscopy and image analysis.

Authors:  E J Boekema; M van Heel
Journal:  Biochim Biophys Acta       Date:  1988-12-02

7.  Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli.

Authors:  M Radermacher; T Wagenknecht; A Verschoor; J Frank
Journal:  J Microsc       Date:  1987-05       Impact factor: 1.758

8.  Quaternary structure of the giant extracellular hemoglobin of the leech Macrobdella decora.

Authors:  O H Kapp; A N Qabar; M C Bonner; M S Stern; D A Walz; M Schmuck; I Pilz; J S Wall; S N Vinogradov
Journal:  J Mol Biol       Date:  1990-05-05       Impact factor: 5.469

9.  Three-dimensional structure of the large ribosomal subunit from Escherichia coli.

Authors:  M Radermacher; T Wagenknecht; A Verschoor; J Frank
Journal:  EMBO J       Date:  1987-04       Impact factor: 11.598

10.  Three-dimensional reconstruction of the 70S Escherichia coli ribosome in ice: the distribution of ribosomal RNA.

Authors:  J Frank; P Penczek; R Grassucci; S Srivastava
Journal:  J Cell Biol       Date:  1991-11       Impact factor: 10.539

View more
  5 in total

1.  Mass distributions of a macromolecular assembly based on electrospray ionization mass spectrometric masses of the constituent subunits.

Authors:  Leonid Hanin; Brian Green; Franck Zal; Serge Vinogradov
Journal:  J Biosci       Date:  2003-09       Impact factor: 1.826

2.  Small angle X-ray scattering studies and modeling of Eudistylia vancouverii chlorocruorin and Macrobdella decora hemoglobin.

Authors:  Angelika Krebs; Helmut Durchschlag; Peter Zipper
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

3.  Low resolution crystal structure of Arenicola erythrocruorin: influence of coiled coils on the architecture of a megadalton respiratory protein.

Authors:  William E Royer; Michael N Omartian; James E Knapp
Journal:  J Mol Biol       Date:  2006-10-11       Impact factor: 5.469

4.  Globin and linker sequences of the giant extracellular hemoglobin from the leech Macrobdella decora.

Authors:  Tomohiko Suzuki; Serge N Vinogradov
Journal:  J Protein Chem       Date:  2003-04

5.  Crystallization and preliminary structural analysis of the giant haemoglobin from Glossoscolex paulistus at 3.2 Å.

Authors:  J F R Bachega; L Bleicher; E R Horjales; P S Santiago; R C Garratt; M Tabak
Journal:  J Synchrotron Radiat       Date:  2010-11-05       Impact factor: 2.616

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.