Literature DB >> 3297672

Three-dimensional structure of the large ribosomal subunit from Escherichia coli.

M Radermacher, T Wagenknecht, A Verschoor, J Frank.   

Abstract

The three-dimensional structure of the large (50S) ribosomal subunit from Escherichia coli has been determined from electron micrographs of negatively stained specimens. A new method of three-dimensional reconstruction was used which combines many images of individual subunits recorded at a single high tilt angle. A prominent feature of the reconstruction is a large groove on the side of the subunit that interacts with the small ribosomal subunit. This feature is probably of functional significance as it includes the regions where the peptidyl transferase site and the binding locations of the elongation factors have been mapped previously by immunoelectron microscopy.

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Year:  1987        PMID: 3297672      PMCID: PMC553509          DOI: 10.1002/j.1460-2075.1987.tb04865.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  40 in total

1.  Structure of protein-deficient 50 S ribosomal subunits. Particles without 5 S RNA-protein complex retain the L7/L12 stalk and associate with 30 S subunits.

Authors:  O M Selivanova; G M Gongadze; A T Gudkov; V D Vasiliev
Journal:  FEBS Lett       Date:  1986-03-03       Impact factor: 4.124

Review 2.  Evolving ribosome structure: domains in archaebacteria, eubacteria, eocytes and eukaryotes.

Authors:  J A Lake
Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

3.  Ribosome structure determined by electron microscopy of Escherichia coli small subunits, large subunits and monomeric ribosomes.

Authors:  J A Lake
Journal:  J Mol Biol       Date:  1976-07-25       Impact factor: 5.469

4.  Structural study of translating 70 S ribosomes from Escherichia coli. I. Electron microscopy.

Authors:  V D Vasiliev; O M Selivanova; V I Baranov; A S Spirin
Journal:  FEBS Lett       Date:  1983-05-02       Impact factor: 4.124

5.  Location of eight ribosomal proteins on the surface of the 50S subunit from Escherichia coli.

Authors:  M Stöffler-Meilicke; M Noah; G Stöffler
Journal:  Proc Natl Acad Sci U S A       Date:  1983-11       Impact factor: 11.205

6.  Ribosomal proteins L1, L17 and L27 from Escherichia coli localized at single sites on the large subunit by immune electron microscopy.

Authors:  J A Lake; W A Strycharz
Journal:  J Mol Biol       Date:  1981-12-25       Impact factor: 5.469

7.  Immunoelectron microscopic localization of puromycin binding on the large subunit of the Escherichia coli ribosome.

Authors:  H M Olson; P G Grant; B S Cooperman; D G Glitz
Journal:  J Biol Chem       Date:  1982-03-10       Impact factor: 5.157

8.  The correlation averaging of a regularly arranged bacterial cell envelope protein.

Authors:  W O Saxton; W Baumeister
Journal:  J Microsc       Date:  1982-08       Impact factor: 1.758

9.  New low resolution model for 50S subunit of Escherichia coli ribosomes.

Authors:  H B Stuhrmann; J Haas; K Ibel; B Wolf; M H Koch; R Parfait; R R Crichton
Journal:  Proc Natl Acad Sci U S A       Date:  1976-07       Impact factor: 11.205

10.  Analysis of models of irregular shape by solution X-ray scattering: the case of the 50S ribosomal subunit from E. coli.

Authors:  A Tardieu; P Vachette
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  18 in total

1.  Three-dimensional reconstruction of the ribosome from Escherichia coli.

Authors:  T Wagenknecht; J M Carazo; M Radermacher; J Frank
Journal:  Biophys J       Date:  1989-03       Impact factor: 4.033

2.  Three-Dimensional Structure Determination from Common Lines in Cryo-EM by Eigenvectors and Semidefinite Programming().

Authors:  A Singer; Y Shkolnisky
Journal:  SIAM J Imaging Sci       Date:  2011-06-07       Impact factor: 2.867

3.  Profile of Joachim Frank.

Authors:  Kaspar Mossman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-04       Impact factor: 11.205

4.  Molecular architecture of the human pre-mRNA 3' processing complex.

Authors:  Yongsheng Shi; Dafne Campigli Di Giammartino; Derek Taylor; Ali Sarkeshik; William J Rice; John R Yates; Joachim Frank; James L Manley
Journal:  Mol Cell       Date:  2009-02-13       Impact factor: 17.970

5.  The movement of tRNA through the ribosome.

Authors:  J Frank; R K Agrawal
Journal:  Biophys J       Date:  1998-01       Impact factor: 4.033

6.  Structures of small subunit ribosomal RNAs in situ from Escherichia coli and Thermomyces lanuginosus.

Authors:  D R Beniac; G Harauz
Journal:  Mol Cell Biochem       Date:  1995-07-19       Impact factor: 3.396

7.  Solution scattering from 50S ribosomal subunit resolves inconsistency between electron microscopic models.

Authors:  D I Svergun; J S Pedersen; I N Serdyuk; M H Koch
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-06       Impact factor: 11.205

8.  Three-dimensional reconstruction of Macrobdella decora (leech) hemoglobin by cryoelectron microscopy.

Authors:  F de Haas; N Biosset; J C Taveau; O Lambert; S N Vinogradov; J N Lamy
Journal:  Biophys J       Date:  1996-04       Impact factor: 4.033

9.  Viewing Direction Estimation in Cryo-EM Using Synchronization.

Authors:  Yoel Shkolnisky; Amit Singer
Journal:  SIAM J Imaging Sci       Date:  2012-09-01       Impact factor: 2.867

10.  Variations of the three-dimensional structure of the Escherichia coli ribosome in the range of overlap views. An application of the methods of multicone and local single-cone three-dimensional reconstruction.

Authors:  J M Carazo; T Wagenknecht; J Frank
Journal:  Biophys J       Date:  1989-03       Impact factor: 4.033

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