Literature DB >> 8770224

Titration of aspartate-85 in bacteriorhodopsin: what it says about chromophore isomerization and proton release.

S P Balashov1, E S Imasheva, R Govindjee, T G Ebrey.   

Abstract

Titration of Asp-85, the proton acceptor and part of the counterion in bacteriorhodopsin, over a wide pH range (2-11) leads us to the following conclusions: 1) Asp-85 has a complex titration curve with two values of pKa; in addition to a main transition with pKa = 2.6 it shows a second inflection point at high pH (pKa = 9.7 in 150-mM KCl). This complex titration behavior of Asp-85 is explained by interaction of Asp-85 with an ionizable residue X'. As follows from the fit of the titration curve of Asp-85, deprotonation of X' increases the proton affinity of Asp-85 by shifting its pKa from 2.6 to 7.5. Conversely, protonation of Asp-85 decreases the pKa of X' by 4.9 units, from 9.7 to 4.8. The interaction between Asp-85 and X' has important implications for the mechanism of proton transfer. In the photocycle after the formation of M intermediate (and protonation of Asp-85) the group X' should release a proton. This deprotonated state of X' would stabilize the protonated state of Asp-85.2) Thermal isomerization of the chromophore (dark adaptation) occurs on transient protonation of Asp-85 and formation of the blue membrane. The latter conclusion is based on the observation that the rate constant of dark adaptation is directly proportional to the fraction of blue membrane (in which Asp-85 is protonated) between pH 2 and 11. The rate constant of isomerization is at least 10(4) times faster in the blue membrane than in the purple membrane. The protonated state of Asp-85 probably is important for the catalysis not only of all-trans <=> 13-cis thermal isomerization during dark adaptation but also of the reisomerization of the chromophore from 13-cis to all-trans configuration during N-->O-->bR transition in the photocycle. This would explain why Asp-85 stays protonated in the N and O intermediates.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8770224      PMCID: PMC1224946          DOI: 10.1016/S0006-3495(96)79591-7

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  45 in total

Review 1.  A unifying concept for ion translocation by retinal proteins.

Authors:  D Oesterhelt; J Tittor; E Bamberg
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

Review 2.  Purple membrane: surface charge density and the multiple effect of pH and cations.

Authors:  R Jonas; Y Koutalos; T G Ebrey
Journal:  Photochem Photobiol       Date:  1990-12       Impact factor: 3.421

3.  Correlation between absorption maxima and thermal isomerization rates in bacteriorhodopsin.

Authors:  S J Milder
Journal:  Biophys J       Date:  1991-08       Impact factor: 4.033

Review 4.  From femtoseconds to biology: mechanism of bacteriorhodopsin's light-driven proton pump.

Authors:  R A Mathies; S W Lin; J B Ames; W T Pollard
Journal:  Annu Rev Biophys Biophys Chem       Date:  1991

5.  Rapid pH change due to bacteriorhodopsin measured with a tin-oxide electrode.

Authors:  B Robertson; E P Lukashev
Journal:  Biophys J       Date:  1995-04       Impact factor: 4.033

6.  Estimated acid dissociation constants of the Schiff base, Asp-85, and Arg-82 during the bacteriorhodopsin photocycle.

Authors:  L S Brown; L Bonet; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1993-07       Impact factor: 4.033

7.  Effect of light-adaptation on the photoreaction of bacteriorhodopsin from Halobacterium halobium.

Authors:  K Ohno; Y Takeuchi; M Yoshida
Journal:  Biochim Biophys Acta       Date:  1977-12-23

8.  Effect of acid pH on the absorption spectra and photoreactions of bacteriorhodopsin.

Authors:  P C Mowery; R H Lozier; Q Chae; Y W Tseng; M Taylor; W Stoeckenius
Journal:  Biochemistry       Date:  1979-09-18       Impact factor: 3.162

9.  Effects of substitution of tyrosine 57 with asparagine and phenylalanine on the properties of bacteriorhodopsin.

Authors:  R Govindjec; M Kono; S P Balashov; E Imasheva; M Sheves; T G Ebrey
Journal:  Biochemistry       Date:  1995-04-11       Impact factor: 3.162

10.  The effect of protonation and electrical interactions on the stereochemistry of retinal schiff bases.

Authors:  P Tavan; K Schulten; D Oesterhelt
Journal:  Biophys J       Date:  1985-03       Impact factor: 4.033

View more
  52 in total

1.  Molecular basis for pH sensitivity and proton transfer in green fluorescent protein: protonation and conformational substates from electrostatic calculations.

Authors:  C Scharnagl; R Raupp-Kossmann; S F Fischer
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  Charge motions during the photocycle of pharaonis halorhodopsin.

Authors:  K Ludmann; G Ibron; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

3.  Molecular dynamics study of the nature and origin of retinal's twisted structure in bacteriorhodopsin.

Authors:  E Tajkhorshid; J Baudry; K Schulten; S Suhai
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

4.  Fourier transform infrared evidence for early deprotonation of Asp(85) at alkaline pH in the photocycle of bacteriorhodopsin mutants containing E194Q.

Authors:  T Lazarova; C Sanz; E Querol; E Padrós
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

5.  On the protein residues that control the yield and kinetics of O(630) in the photocycle of bacteriorhodopsin.

Authors:  Q Li; S Bressler; D Ovrutsky; M Ottolenghi; N Friedman; M Sheves
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

6.  Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin.

Authors:  J Baudry; S Crouzy; B Roux; J C Smith
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

7.  Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.

Authors:  C Rödig; I Chizhov; O Weidlich; F Siebert
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

8.  Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction.

Authors:  H Luecke; B Schobert; J K Lanyi; E N Spudich; J L Spudich
Journal:  Science       Date:  2001-07-12       Impact factor: 47.728

9.  Binding of calcium ions to bacteriorhodopsin.

Authors:  G Váró; L S Brown; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

10.  The photochemical reaction cycle of proteorhodopsin at low pH.

Authors:  Melinda Lakatos; Janos K Lanyi; Juliánna Szakács; György Váró
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.