Literature DB >> 12719254

The photochemical reaction cycle of proteorhodopsin at low pH.

Melinda Lakatos1, Janos K Lanyi, Juliánna Szakács, György Váró.   

Abstract

The proton acceptor group in the recently described retinal protein, proteorhodopsin has an unusually high pK(a) of 7.1. It was shown that at pH above this pK(a), illumination initiates a photocycle similar to that of bacteriorhodopsin, and the protein transports proton across the cell membrane. Recently it was reported that proteorhodopsin, unlike bacteriorhodopsin, transports protons at pH below the pK(a) of the proton acceptor, and this transport is in the reverse direction. We have investigated the photocycle of proteorhodopsin at such low pH. At pH 5, three spectrally distinct intermediates K, L, and N, and another spectrally silent one, PR', could be identified, but a deprotonated Schiff base containing M-like intermediate, characteristic for proton pumping activity, does not accumulate. All the reactions between the intermediates are close to equilibrium, except the last transition from PR' to PR, when the protein returns to its initial unexcited state in a quasiunidirectional reaction. The electric signal measurements indicate that although charge motions are detected inside the protein, their net dislocation is zero, indicating that contrary to the earlier reported, at low pH no charged particle is transported across the membrane.

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Year:  2003        PMID: 12719254      PMCID: PMC1302885          DOI: 10.1016/S0006-3495(03)70049-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  19 in total

1.  Characterization of the proton-transporting photocycle of pharaonis halorhodopsin.

Authors:  A Kulcsár; G I Groma; J K Lanyi; G Váró
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

2.  Proteorhodopsin phototrophy in the ocean.

Authors:  O Béjà; E N Spudich; J L Spudich; M Leclerc; E F DeLong
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

3.  Proton transfers in the photochemical reaction cycle of proteorhodopsin.

Authors:  Andrei K Dioumaev; Leonid S Brown; Jennifer Shih; Elena N Spudich; John L Spudich; Janos K Lanyi
Journal:  Biochemistry       Date:  2002-04-30       Impact factor: 3.162

Review 4.  Analogies between halorhodopsin and bacteriorhodopsin.

Authors:  G Váró
Journal:  Biochim Biophys Acta       Date:  2000-08-30

5.  Characterization of the photochemical reaction cycle of proteorhodopsin.

Authors:  György Váró; Leonid S Brown; Melinda Lakatos; Janos K Lanyi
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

6.  Proteorhodopsin is a light-driven proton pump with variable vectoriality.

Authors:  Thomas Friedrich; Sven Geibel; Rolf Kalmbach; Igor Chizhov; Kenichi Ataka; Joachim Heberle; Martin Engelhard; Ernst Bamberg
Journal:  J Mol Biol       Date:  2002-08-30       Impact factor: 5.469

7.  Kinetic and thermodynamic study of the bacteriorhodopsin photocycle over a wide pH range.

Authors:  K Ludmann; C Gergely; G Váró
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

8.  Effect of acid pH on the absorption spectra and photoreactions of bacteriorhodopsin.

Authors:  P C Mowery; R H Lozier; Q Chae; Y W Tseng; M Taylor; W Stoeckenius
Journal:  Biochemistry       Date:  1979-09-18       Impact factor: 3.162

Review 9.  Retinylidene proteins: structures and functions from archaea to humans.

Authors:  J L Spudich; C S Yang; K H Jung; E N Spudich
Journal:  Annu Rev Cell Dev Biol       Date:  2000       Impact factor: 13.827

10.  Detection of fast light-activated H+ release and M intermediate formation from proteorhodopsin.

Authors:  Richard A Krebs; Ulrike Alexiev; Ranga Partha; Anne Marie DeVita; Mark S Braiman
Journal:  BMC Physiol       Date:  2002-04-09
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  16 in total

1.  The nitrate transporting photochemical reaction cycle of the pharaonis halorhodopsin.

Authors:  Zoltán Bálint; Melinda Lakatos; Constanta Ganea; Janos K Lanyi; György Váró
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

2.  Green proteorhodopsin reconstituted into nanoscale phospholipid bilayers (nanodiscs) as photoactive monomers.

Authors:  Matthew J Ranaghan; Christine T Schwall; Nathan N Alder; Robert R Birge
Journal:  J Am Chem Soc       Date:  2011-10-26       Impact factor: 15.419

3.  pH-dependent transitions in xanthorhodopsin.

Authors:  Eleonora S Imasheva; Sergei P Balashov; Jennifer M Wang; Janos K Lanyi
Journal:  Photochem Photobiol       Date:  2006 Nov-Dec       Impact factor: 3.421

4.  First steps of retinal photoisomerization in proteorhodopsin.

Authors:  Martin O Lenz; Robert Huber; Bernhard Schmidt; Peter Gilch; Rolf Kalmbach; Martin Engelhard; Josef Wachtveitl
Journal:  Biophys J       Date:  2006-04-07       Impact factor: 4.033

5.  Initial reaction dynamics of proteorhodopsin observed by femtosecond infrared and visible spectroscopy.

Authors:  Karsten Neumann; Mirka-Kristin Verhoefen; Ingrid Weber; Clemens Glaubitz; Josef Wachtveitl
Journal:  Biophys J       Date:  2008-03-07       Impact factor: 4.033

6.  Characterization of the primary photochemistry of proteorhodopsin with femtosecond spectroscopy.

Authors:  Alisa Rupenyan; Ivo H M van Stokkum; Jos C Arents; Rienk van Grondelle; Klaas Hellingwerf; Marie Louise Groot
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

7.  The EF loop in green proteorhodopsin affects conformation and photocycle dynamics.

Authors:  Michaela Mehler; Frank Scholz; Sandra J Ullrich; Jiafei Mao; Markus Braun; Lynda J Brown; Richard C D Brown; Sarah A Fiedler; Johanna Becker-Baldus; Josef Wachtveitl; Clemens Glaubitz
Journal:  Biophys J       Date:  2013-07-16       Impact factor: 4.033

8.  Gloeobacter rhodopsin, limitation of proton pumping at high electrochemical load.

Authors:  Arend Vogt; Jonas Wietek; Peter Hegemann
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

9.  Characterization of the ground state dynamics of proteorhodopsin by NMR and optical spectroscopies.

Authors:  Jochen Stehle; Frank Scholz; Frank Löhr; Sina Reckel; Christian Roos; Michaela Blum; Markus Braun; Clemens Glaubitz; Volker Dötsch; Josef Wachtveitl; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2012-11-17       Impact factor: 2.835

10.  Lipid bilayer composition can influence the orientation of proteorhodopsin in artificial membranes.

Authors:  Ramya Tunuguntla; Mangesh Bangar; Kyunghoon Kim; Pieter Stroeve; Caroline M Ajo-Franklin; Aleksandr Noy
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

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