Literature DB >> 8765685

Oligomerization of uridine phosphorimidazolides on montmorillonite: a model for the prebiotic synthesis of RNA on minerals.

P Z Ding1, K Kawamura, J P Ferris.   

Abstract

The 5'-phosphorimidazolide of uridine reacts on Na(+)-montmorillonite 22A in aqueous solution to give oligomers as long as 7 mers. The maximum chain length increases to 9 mers and the overall oligomer yield increases when 9:1 ImpU, A5' ppA mixtures react under the same conditions. The oligomer yield and maximum chain length decreases with the structure of the added pyrophosphate in the order A5' ppA > A5' ppU > U5' ppU. Structure analysis of individual oligomer fractions was performed by selective enzymatic hydrolyses followed by HPLC analysis of the products. The regioselectivity for 3',5'-bond formation is 80-90% in the 9:1 ImpU, A5' ppA reaction, a percentage comparable to that observed in the 9:1 ImpA, A5' ppA reaction. Oligomerization of ImpU is inhibited by addition of dA5' ppdA, and MeppA. No oligomers containing A5' ppU were products of the 9:1 ImpU,A5' ppA reaction, a finding consistent with the simple addition of the ImpU to the A5' ppA and not the rearrangement of an ImpU-A5' ppA adduct. Concentrations of lysine or arginine which were close to that of the ImpU did not inhibit oligomer formation. Treatment of Na(+)-montmorillonite with 1 M arginine yielded arginine-montmorillonite, an amino acid-mineral adduct which did not catalyze ImpU oligomerization. Neither the 4-9 mers formed in the 9:1 ImpU, A5' ppA reaction nor the 4-9 mers formed by the base hydrolysis of poly(U) served as templates for the formation of oligo(A)s.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1996        PMID: 8765685     DOI: 10.1007/bf01809853

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  19 in total

1.  PROTON IONIZATION FROM ADENOSINE.

Authors:  R M IZATT; L D HANSEN; J H RYTTING; J J CHRISTENSEN
Journal:  J Am Chem Soc       Date:  1965-06-20       Impact factor: 15.419

2.  Oligomerization of ribonucleotides on montmorillonite: reaction of the 5'-phosphorimidazolide of adenosine.

Authors:  J P Ferris; G Ertem
Journal:  Science       Date:  1992-09-04       Impact factor: 47.728

3.  A model for the RNA-catalyzed replication of RNA.

Authors:  T R Cech
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

4.  Selective phosphorylation of the cis-2',3'-diol of unprotected ribonucleosides with trimetaphosphate in aqueous solution.

Authors:  R Saffhill
Journal:  J Org Chem       Date:  1970-09       Impact factor: 4.354

5.  The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.

Authors:  C Guerrier-Takada; K Gardiner; T Marsh; N Pace; S Altman
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

6.  Oligomerization reactions of ribonucleotides: the reaction of the 5'-phosphorimidazolide of nucleosides on montmorillonite and other minerals.

Authors:  J P Ferris; G Ertem
Journal:  Orig Life Evol Biosph       Date:  1992       Impact factor: 1.950

7.  Studies of oligoadenylate formation on a poly (U) template.

Authors:  R Lohrmann; L E Orgel
Journal:  J Mol Evol       Date:  1979-03-15       Impact factor: 2.395

8.  Chemical self-replication of palindromic duplex DNA.

Authors:  T Li; K C Nicolaou
Journal:  Nature       Date:  1994-05-19       Impact factor: 49.962

9.  Self-replication of complementary nucleotide-based oligomers.

Authors:  D Sievers; G von Kiedrowski
Journal:  Nature       Date:  1994-05-19       Impact factor: 49.962

10.  Template-directed synthesis of oligoadenylates catalyzed by Pb2+ ions.

Authors:  H L Sleeper; R Lohrmann; L E Orgel
Journal:  J Mol Evol       Date:  1979-10       Impact factor: 2.395

View more
  25 in total

1.  The fidelity of template-directed oligonucleotide ligation and the inevitability of polymerase function.

Authors:  K D James; A D Ellington
Journal:  Orig Life Evol Biosph       Date:  1999-08       Impact factor: 1.950

2.  The possible role of volcanic aquifers in prebiologic genesis of organic compounds and RNA.

Authors:  J Washington
Journal:  Orig Life Evol Biosph       Date:  2000-02       Impact factor: 1.950

3.  Primary sources of phosphorus and phosphates in chemical evolution.

Authors:  E Macia; M V Hernandez; J Oro
Journal:  Orig Life Evol Biosph       Date:  1997-12       Impact factor: 1.950

4.  Effect of dinucleoside pyrophosphates on the oligomerization of activated mononucleotides on Na(+)-montmorillonite: reaction of 5'-phosphoro-4-(dimethylamino)pyridinium [4-(CH3)2NpypA] with A5'ppA.

Authors:  K J Prabahar; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1997-12       Impact factor: 1.950

5.  Effect of inhibitors on the montmorillonite clay-catalyzed formation of RNA: studies on the reaction pathway.

Authors:  K J Wang; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  2001 Aug-Oct       Impact factor: 1.950

Review 6.  The origins of the RNA world.

Authors:  Michael P Robertson; Gerald F Joyce
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-05-01       Impact factor: 10.005

7.  Homochiral selectivity in RNA synthesis: montmorillonite-catalyzed quaternary reactions of D, L-purine with D, L- pyrimidine nucleotides.

Authors:  Prakash C Joshi; Michael F Aldersley; James P Ferris
Journal:  Orig Life Evol Biosph       Date:  2010-08-20       Impact factor: 1.950

Review 8.  The RNA world on ice: a new scenario for the emergence of RNA information.

Authors:  Alexander V Vlassov; Sergei A Kazakov; Brian H Johnston; Laura F Landweber
Journal:  J Mol Evol       Date:  2005-07-13       Impact factor: 2.395

9.  The sugar model: catalytic flow reactor dynamics of pyruvaldehyde synthesis from triose catalyzed by poly-l-lysine contained in a dialyzer.

Authors:  A L Weber
Journal:  Orig Life Evol Biosph       Date:  2001-06       Impact factor: 1.950

10.  Montmorillonite, oligonucleotides, RNA and origin of life.

Authors:  Gözen Ertem
Journal:  Orig Life Evol Biosph       Date:  2004-12       Impact factor: 1.950

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.