Literature DB >> 8661700

A comparative map of the porcine and human genomes demonstrates ZOO-FISH and gene mapping-based chromosomal homologies.

L Frönicke1, B P Chowdhary, H Scherthan, I Gustavsson.   

Abstract

ZOO-FISH with chromosome-specific DNA libraries (CSLs) from individual flow-sorted human chromosomes was applied on porcine metaphase chromosomes to establish segment homology between the pig and human karyotypes. Forty-seven porcine chromosomal segments corresponding to all human chromosomes except the Y were delineated, resulting in a nearly complete coverage of the porcine karyotype. The syntenic segments detected were further confirmed by the gene mapping information available in the two species. A map demarcating physical boundaries of human homologies on individual pig chromosomes is complemented with a detail survey of the physical and genetic linkage mapping data in the two species. The resultant map, thus, provides a comprehensive and updated comparative status of the human and porcine genomes.

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Year:  1996        PMID: 8661700     DOI: 10.1007/s003359900084

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  25 in total

1.  Veterinary medicine. Molecular genetics arrives on the farm.

Authors:  J E Womack
Journal:  Nature       Date:  1992-11-12       Impact factor: 49.962

2.  Construction and characterization of plasmid libraries enriched in sequences from single human chromosomes.

Authors:  C Collins; W L Kuo; R Segraves; J Fuscoe; D Pinkel; J W Gray
Journal:  Genomics       Date:  1991-12       Impact factor: 5.736

3.  Determination of the DNA content of human chromosomes by flow cytometry.

Authors:  P Harris; E Boyd; B D Young; M A Ferguson-Smith
Journal:  Cytogenet Cell Genet       Date:  1986

4.  Livestock genome research on the march.

Authors:  J Hetzel
Journal:  Nat Genet       Date:  1993-08       Impact factor: 38.330

5.  Libraries for each human chromosome, constructed from sorter-enriched chromosomes by using linker-adaptor PCR.

Authors:  M Vooijs; L C Yu; D Tkachuk; D Pinkel; D Johnson; J W Gray
Journal:  Am J Hum Genet       Date:  1993-03       Impact factor: 11.025

6.  Swine chromosomal DNA quantification by bivariate flow karyotyping and karyotype interpretation.

Authors:  A Schmitz; B Chaput; P Fouchet; M N Guilly; G Frelat; M Vaiman
Journal:  Cytometry       Date:  1992

7.  Standard karyotype of the domestic pig. Committee for the Standardized Karyotype of the Domestic Pig.

Authors:  I Gustavsson
Journal:  Hereditas       Date:  1988       Impact factor: 3.271

8.  A primary linkage map of the porcine genome reveals a low rate of genetic recombination.

Authors:  H Ellegren; B P Chowdhary; M Johansson; L Marklund; M Fredholm; I Gustavsson; L Andersson
Journal:  Genetics       Date:  1994-08       Impact factor: 4.562

9.  Chromosome painting with human chromosome-specific DNA libraries reveals the extent and distribution of conserved segments in bovine chromosomes.

Authors:  H Hayes
Journal:  Cytogenet Cell Genet       Date:  1995

10.  Genetic mapping of quantitative trait loci for growth and fatness in pigs.

Authors:  L Andersson; C S Haley; H Ellegren; S A Knott; M Johansson; K Andersson; L Andersson-Eklund; I Edfors-Lilja; M Fredholm; I Hansson
Journal:  Science       Date:  1994-03-25       Impact factor: 47.728

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  51 in total

1.  High-resolution comparative chromosome painting in the Arizona collared peccary (Pecari tajacu, Tayassuidae): a comparison with the karyotype of pig and sheep.

Authors:  Filomena Adega; Raquel Chaves; Andrea Kofler; Paul R Krausman; Julio Masabanda; Johannes Wienberg; Henrique Guedes-Pinto
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

Review 2.  Numerous groups of chromosomal regional paralogies strongly indicate two genome doublings at the root of the vertebrates.

Authors:  Lars-Gustav Lundin; Dan Larhammar; Finn Hallböök
Journal:  J Struct Funct Genomics       Date:  2003

3.  Interstitial telomeric sites and NORs in Hartmann's zebra (Equus zebra hartmannae) chromosomes.

Authors:  Avni Santani; Terje Raudsepp; Bhanu P Chowdhary
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

4.  Characterization of 298 ESTs from porcine back fat tissue and their assignment to the SSRH radiation hybrid map.

Authors:  Ayumi Mikawa; Hideaki Suzuki; Kohei Suzuki; Daisuke Toki; Hirohide Uenishi; Takashi Awata; Noriyuki Hamasima
Journal:  Mamm Genome       Date:  2004-04       Impact factor: 2.957

5.  FISH mapping of the IGF2 gene in horse and donkey-detection of homoeology with HSA11.

Authors:  T Raudsepp; K Otte; B Rozell; B P Chowdhary
Journal:  Mamm Genome       Date:  1997-08       Impact factor: 2.957

6.  Linkage assignment of eleven genes to the porcine genome.

Authors:  Z Hu; G A Rohrer; R T Stone; M Rutherford; M A Osinski; M S Pampusch; M P Murtaugh; D R Brown; C W Beattie
Journal:  Mamm Genome       Date:  1997-08       Impact factor: 2.957

Review 7.  The genome and the nucleus: a marriage made by evolution. Genome organisation and nuclear architecture.

Authors:  Helen A Foster; Joanna M Bridger
Journal:  Chromosoma       Date:  2005-10-15       Impact factor: 4.316

8.  A new 4016-marker radiation hybrid map for porcine-human genome analysis.

Authors:  Noriyuki Hamasima; Ayumi Mikawa; Hideaki Suzuki; Kohei Suzuki; Hirohide Uenishi; Takashi Awata
Journal:  Mamm Genome       Date:  2008-01-11       Impact factor: 2.957

9.  A quantitative real-time PCR method using an X-linked gene for sex typing in pigs.

Authors:  Maria Ballester; Anna Castelló; Yuliaxis Ramayo-Caldas; Josep M Folch
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

10.  The origin of human chromosome 1 and its homologs in placental mammals.

Authors:  William J Murphy; Lutz Frönicke; Stephen J O'Brien; Roscoe Stanyon
Journal:  Genome Res       Date:  2003-07-17       Impact factor: 9.043

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