Literature DB >> 22843326

A quantitative real-time PCR method using an X-linked gene for sex typing in pigs.

Maria Ballester1, Anna Castelló, Yuliaxis Ramayo-Caldas, Josep M Folch.   

Abstract

At present, a wide range of molecular sex-typing protocols in wild and domestic animals are available. In pigs, most of these methods are based on PCR amplification of X-Y homologous genes followed by gel electrophoresis which is time-consuming and in some cases expensive. In this paper, we describe, for the first time, a SYBR green-based quantitative real-time PCR (qPCR) assay using an X-linked gene, the glycoprotein M6B, for genetic sexing of pigs. Taking into account the differences in the glycoprotein M6B gene copy number between genders, we determine the correct sex of 54 pig samples from either diaphragm or hair follicle from different breeds using the 2(-ΔΔCT) method for relative quantification. Our qPCR assay represents a quick, inexpensive, and reliable tool for sex determination in pigs. This new protocol could be easily adapted to other species in which the sex determination was required.

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Year:  2013        PMID: 22843326     DOI: 10.1007/s12033-012-9589-5

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  23 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Rapid and accurate determination of zygosity in transgenic animals by real-time quantitative PCR.

Authors:  Laurent Tesson; Jean-Marie Heslan; Séverine Ménoret; Ignacio Anegon
Journal:  Transgenic Res       Date:  2002-02       Impact factor: 2.788

3.  Real-time quantitative PCR-based system for determining transgene copy number in transgenic animals.

Authors:  Maria Ballester; Anna Castelló; Elena Ibáñez; Armand Sánchez; Josep M Folch
Journal:  Biotechniques       Date:  2004-10       Impact factor: 1.993

4.  PLP1 and GPM6B intragenic copy number analysis by MAPH in 262 patients with hypomyelinating leukodystrophies: Identification of one partial triplication and two partial deletions of PLP1.

Authors:  Patricia Combes; Marie-Noelle Bonnet-Dupeyron; Fernande Gauthier-Barichard; Raphael Schiffmann; Enrico Bertini; Diana Rodriguez; John A L Armour; Odile Boespflug-Tanguy; Catherine Vaurs-Barrière
Journal:  Neurogenetics       Date:  2006-01-17       Impact factor: 2.660

5.  Chromosomal mapping of the human M6 genes.

Authors:  S Olinsky; B T Loop; A DeKosky; B Ripepi; W Weng; J Cummins; S L Wenger; Y Yan; C Lagenaur; V Narayanan
Journal:  Genomics       Date:  1996-05-01       Impact factor: 5.736

6.  A comparative map of the porcine and human genomes demonstrates ZOO-FISH and gene mapping-based chromosomal homologies.

Authors:  L Frönicke; B P Chowdhary; H Scherthan; I Gustavsson
Journal:  Mamm Genome       Date:  1996-04       Impact factor: 2.957

7.  The amelogenin loci span an ancient pseudoautosomal boundary in diverse mammalian species.

Authors:  Mineyo Iwase; Yoko Satta; Yuriko Hirai; Hirohisa Hirai; Hirotami Imai; Naoyuki Takahata
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-02       Impact factor: 11.205

8.  Length difference between equine ZFX and ZFY genes and its application for molecular sex determination.

Authors:  Sang-Hyun Han; Byoung-Chul Yang; Moon-Suck Ko; Hong-Shik Oh; Sung-Soo Lee
Journal:  J Assist Reprod Genet       Date:  2010-09-01       Impact factor: 3.412

9.  X- and Y-chromosome specific variants of the amelogenin gene allow sex determination in sheep (Ovis aries) and European red deer (Cervus elaphus).

Authors:  I Pfeiffer; B Brenig
Journal:  BMC Genet       Date:  2005-03-16       Impact factor: 2.797

10.  High-throughput avian molecular sexing by SYBR green-based real-time PCR combined with melting curve analysis.

Authors:  Hsueh-Wei Chang; Chun-An Cheng; De-Leung Gu; Chia-Che Chang; San-Hua Su; Cheng-Hao Wen; Yii-Cheng Chou; Ta-Ching Chou; Cheng-Te Yao; Chi-Li Tsai; Chien-Chung Cheng
Journal:  BMC Biotechnol       Date:  2008-02-12       Impact factor: 2.563

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  1 in total

1.  A Simple, Affordable, and Rapid Visual CRISPR-Based Field Test for Sex Determination of Earlier Porcine Embryos and Pork Products.

Authors:  Dagang Tao; Jiajia Liu; Qiushi Li; Yu Jiang; Bingrong Xu; Emmanuel Mulaya Khazalwa; Ping Gong; Jing Xu; Yunlong Ma; Jinxue Ruan; Lili Niu; Shengsong Xie
Journal:  Mol Biotechnol       Date:  2022-07-15       Impact factor: 2.860

  1 in total

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