Literature DB >> 8610155

Direct measurement of salt-bridge solvation energies using a peptide model system: implications for protein stability.

W C Wimley1, K Gawrisch, T P Creamer, S H White.   

Abstract

The solvation energies of salt bridges formed between the terminal carboxyl of the host pentapeptide AcWL- X-LL and the side chains of Arg or Lys in the guest (X) position have been measured. The energies were derived from octanol-to-buffer transfer free energies determined between pH 1 and pH 9. 13C NMR measurements show that the salt bridges form in the octanol phase, but not in the buffer phase, when the side chains and the terminal carboxyl group are charged. The free energy of salt-bridge formation in octanol is approximately -4 kcal/mol (1 cal = 4.184 J), which is equal to or slightly larger than the sum of the solvation energies of noninteracting pairs of charged side chains. This is about one-half the free energy that would result from replacing a charge pair in octanol with a pair of hydrophobic residues of moderate size. Therefore, salt bridging in octanol can change the favorable aqueous solvation energy of a pair of oppositely charged residues to neutral or slightly unfavorable but cannot provide the same free energy decrease as hydrophobic residues. This is consistent with recent computational and experimental studies of protein stability.

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Year:  1996        PMID: 8610155      PMCID: PMC39747          DOI: 10.1073/pnas.93.7.2985

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Estimating the contribution of engineered surface electrostatic interactions to protein stability by using double-mutant cycles.

Authors:  L Serrano; A Horovitz; B Avron; M Bycroft; A R Fersht
Journal:  Biochemistry       Date:  1990-10-09       Impact factor: 3.162

2.  Evaluation of protein models by atomic solvation preference.

Authors:  L Holm; C Sander
Journal:  J Mol Biol       Date:  1992-05-05       Impact factor: 5.469

3.  Contributions of the large hydrophobic amino acids to the stability of staphylococcal nuclease.

Authors:  D Shortle; W E Stites; A K Meeker
Journal:  Biochemistry       Date:  1990-09-04       Impact factor: 3.162

Review 4.  Areas, volumes, packing and protein structure.

Authors:  F M Richards
Journal:  Annu Rev Biophys Bioeng       Date:  1977

5.  Solvation energy in protein folding and binding.

Authors:  D Eisenberg; A D McLachlan
Journal:  Nature       Date:  1986 Jan 16-22       Impact factor: 49.962

6.  Stability of "salt bridges" in membrane proteins.

Authors:  B H Honig; W L Hubbell
Journal:  Proc Natl Acad Sci U S A       Date:  1984-09       Impact factor: 11.205

7.  Energetics of complementary side-chain packing in a protein hydrophobic core.

Authors:  J T Kellis; K Nyberg; A R Fersht
Journal:  Biochemistry       Date:  1989-05-30       Impact factor: 3.162

8.  pH-induced denaturation of proteins: a single salt bridge contributes 3-5 kcal/mol to the free energy of folding of T4 lysozyme.

Authors:  D E Anderson; W J Becktel; F W Dahlquist
Journal:  Biochemistry       Date:  1990-03-06       Impact factor: 3.162

9.  Voiding dysfunction in patients with human T-lymphotropic virus type-1-associated myelopathy (HAM).

Authors:  S Komine; K Yoshida; H Yamashita; Z Masaki
Journal:  Paraplegia       Date:  1989-06

10.  Hydrophobic stabilization in T4 lysozyme determined directly by multiple substitutions of Ile 3.

Authors:  M Matsumura; W J Becktel; B W Matthews
Journal:  Nature       Date:  1988-08-04       Impact factor: 49.962

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  38 in total

1.  Optimization of binding electrostatics: charge complementarity in the barnase-barstar protein complex.

Authors:  L P Lee; B Tidor
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

2.  Role of Lys335 in the metastability and function of inhibitory serpins.

Authors:  H Im; M H Yu
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

3.  Electrostatic interactions in the GCN4 leucine zipper: substantial contributions arise from intramolecular interactions enhanced on binding.

Authors:  Z S Hendsch; B Tidor
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

4.  Transmembrane helix predictions revisited.

Authors:  Chien Peter Chen; Andrew Kernytsky; Burkhard Rost
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

5.  An integrated structural and computational study of the thermostability of two thioredoxin mutants from Alicyclobacillus acidocaldarius.

Authors:  Simonetta Bartolucci; Giuseppina De Simone; Stefania Galdiero; Roberto Improta; Valeria Menchise; Carlo Pedone; Emilia Pedone; Michele Saviano
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

6.  A membrane-translocating peptide penetrates into bilayers without significant bilayer perturbations.

Authors:  Juan Cruz; Mihaela Mihailescu; Greg Wiedman; Katherine Herman; Peter C Searson; William C Wimley; Kalina Hristova
Journal:  Biophys J       Date:  2013-06-04       Impact factor: 4.033

7.  MPEx: a tool for exploring membrane proteins.

Authors:  Craig Snider; Sajith Jayasinghe; Kalina Hristova; Stephen H White
Journal:  Protein Sci       Date:  2009-12       Impact factor: 6.725

Review 8.  Membrane-active peptides: binding, translocation, and flux in lipid vesicles.

Authors:  Paulo F Almeida
Journal:  Biochim Biophys Acta       Date:  2014-04-25

9.  Effects of salt bridges on protein structure and design.

Authors:  C V Sindelar; Z S Hendsch; B Tidor
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

10.  Computation of electrostatic complements to proteins: a case of charge stabilized binding.

Authors:  L T Chong; S E Dempster; Z S Hendsch; L P Lee; B Tidor
Journal:  Protein Sci       Date:  1998-01       Impact factor: 6.725

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