Literature DB >> 24769436

Membrane-active peptides: binding, translocation, and flux in lipid vesicles.

Paulo F Almeida1.   

Abstract

Recently, new and improved methods have been developed to measure translocation of membrane-active peptides (antimicrobial, cytolytic, and amphipathic cell-penetrating peptides) across lipid bilayer membranes. The hypothesis that translocation of membrane-active peptides across a lipid bilayer is determined by the Gibbs energy of insertion of the peptide into the bilayer is re-examined in the light of new experimental tests. The original hypothesis and its motivation are first revisited, examining some of the specific predictions that it generated, followed by the results of the initial tests. Translocation is understood as requiring two previous steps: binding and insertion in the membrane. The problem of peptide binding to membranes, its prediction, measurement, and calculation are addressed. Particular attention is given to understanding the reason for the need for amphipathic structures in the function of membrane-active peptides. Insertion into the membrane is then examined. Hydrophobicity scales are compared, and their influence on calculations is discussed. The relation between translocation and graded or all-or-none peptide-induced flux from or into lipid vesicles is also considered. Finally, the most recent work on translocation is examined, both experimental and from molecular dynamics simulations. This article is part of a Special Issue entitled: Interfacially Active Peptides and Proteins. Guest Editors: William C. Wimley and Kalina Hristova.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Amphipathic; Antimicrobial; Binding; Cell-penetrating; Hydrophobicity; Translocation

Mesh:

Substances:

Year:  2014        PMID: 24769436      PMCID: PMC4109692          DOI: 10.1016/j.bbamem.2014.04.014

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  64 in total

1.  An experiment-based algorithm for predicting the partitioning of unfolded peptides into phosphatidylcholine bilayer interfaces.

Authors:  Kalina Hristova; Stephen H White
Journal:  Biochemistry       Date:  2005-09-20       Impact factor: 3.162

2.  Toroidal pores formed by antimicrobial peptides show significant disorder.

Authors:  Durba Sengupta; Hari Leontiadou; Alan E Mark; Siewert-Jan Marrink
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3.  Translocation of a channel-forming antimicrobial peptide, magainin 2, across lipid bilayers by forming a pore.

Authors:  K Matsuzaki; O Murase; N Fujii; K Miyajima
Journal:  Biochemistry       Date:  1995-05-16       Impact factor: 3.162

4.  Folding of beta-sheet membrane proteins: a hydrophobic hexapeptide model.

Authors:  W C Wimley; K Hristova; A S Ladokhin; L Silvestro; P H Axelsen; S H White
Journal:  J Mol Biol       Date:  1998-04-17       Impact factor: 5.469

5.  Melittin-induced bilayer leakage depends on lipid material properties: evidence for toroidal pores.

Authors:  Daniel Allende; S A Simon; Thomas J McIntosh
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

6.  Binding and reorientation of melittin in a POPC bilayer: computer simulations.

Authors:  Sheeba J Irudayam; Max L Berkowitz
Journal:  Biochim Biophys Acta       Date:  2012-08-02

7.  Elucidating the folding problem of helical peptides using empirical parameters. III. Temperature and pH dependence.

Authors:  V Muñoz; L Serrano
Journal:  J Mol Biol       Date:  1995-01-20       Impact factor: 5.469

8.  Membrane translocation mechanism of the antimicrobial peptide buforin 2.

Authors:  Satoe Kobayashi; Akinori Chikushi; Shiho Tougu; Yuichi Imura; Minoru Nishida; Yoshiaki Yano; Katsumi Matsuzaki
Journal:  Biochemistry       Date:  2004-12-14       Impact factor: 3.162

9.  Structure of tightly membrane-bound mastoparan-X, a G-protein-activating peptide, determined by solid-state NMR.

Authors:  Yasuto Todokoro; Ikuko Yumen; Kei Fukushima; Shin-Won Kang; Jang-Su Park; Toshiyuki Kohno; Kaori Wakamatsu; Hideo Akutsu; Toshimichi Fujiwara
Journal:  Biophys J       Date:  2006-05-19       Impact factor: 4.033

10.  Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.

Authors:  W C Wimley; T P Creamer; S H White
Journal:  Biochemistry       Date:  1996-04-23       Impact factor: 3.162

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  12 in total

1.  Charge Distribution Fine-Tunes the Translocation of α-Helical Amphipathic Peptides across Membranes.

Authors:  Francis D O Ablan; B Logan Spaller; Kaitlyn I Abdo; Paulo F Almeida
Journal:  Biophys J       Date:  2016-10-18       Impact factor: 4.033

2.  The SNAP-25 linker supports fusion intermediates by local lipid interactions.

Authors:  Ahmed Shaaban; Madhurima Dhara; Walentina Frisch; Ali Harb; Ali H Shaib; Ute Becherer; Dieter Bruns; Ralf Mohrmann
Journal:  Elife       Date:  2019-03-18       Impact factor: 8.140

3.  Lysylated phospholipids stabilize models of bacterial lipid bilayers and protect against antimicrobial peptides.

Authors:  Elizabeth Cox; Austen Michalak; Sarah Pagentine; Pamela Seaton; Antje Pokorny
Journal:  Biochim Biophys Acta       Date:  2014-04-26

4.  Using fluorescence microscopy to shed light on the mechanisms of antimicrobial peptides.

Authors:  Anne K Buck; Donald E Elmore; Louise Eo Darling
Journal:  Future Med Chem       Date:  2019-09-13       Impact factor: 3.808

5.  Coarse-grained simulations of hemolytic peptide δ-lysin interacting with a POPC bilayer.

Authors:  Mariah J King; Ashley L Bennett; Paulo F Almeida; Hee-Seung Lee
Journal:  Biochim Biophys Acta       Date:  2016-10-06

6.  Cell-penetrating antimicrobial peptides - prospectives for targeting intracellular infections.

Authors:  Jesper S Bahnsen; Henrik Franzyk; Edward J Sayers; Arwyn T Jones; Hanne M Nielsen
Journal:  Pharm Res       Date:  2015-03-17       Impact factor: 4.200

7.  Vesicle Leakage Reflects the Target Selectivity of Antimicrobial Lipopeptides from Bacillus subtilis.

Authors:  Sebastian Fiedler; Heiko Heerklotz
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

Review 8.  The Antibiotic Peptide Daptomycin Functions by Reorganizing the Membrane.

Authors:  Antje Pokorny; Paulo F Almeida
Journal:  J Membr Biol       Date:  2021-02-23       Impact factor: 1.843

9.  Charged N-terminus of Influenza Fusion Peptide Facilitates Membrane Fusion.

Authors:  Remigiusz Worch; Anita Dudek; Joanna Krupa; Anna Szymaniec; Piotr Setny
Journal:  Int J Mol Sci       Date:  2018-02-14       Impact factor: 5.923

Review 10.  Towards a Quantitative Understanding of Protein-Lipid Bilayer Interactions at the Single Molecule Level: Opportunities and Challenges.

Authors:  Gavin M King; Ioan Kosztin
Journal:  J Membr Biol       Date:  2020-11-16       Impact factor: 1.843

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