Literature DB >> 8609606

The crystal structure of the extracellular domain of human tissue factor refined to 1.7 A resolution.

Y A Muller1, M H Ultsch, A M de Vos.   

Abstract

Exposure of blood to cells expressing tissue factor results in formation of a high-affinity complex with factor VIIa, initiating the extrinsic pathway of blood coagulation by the activation of factors IX and X. The structure of the extracellular portion of tissue factor was refined to a crystallographic R-value of 20.4% to a resolution of 1.69 A against synchroton data collected from a flash-frozen crystal. The structure consists of two fibronectin type III modules whose hydrophobic cores merge in the domain-domain interface, suggesting that the extracellular portion serves as a relatively rigid template for factor VIIa binding. Analysis of the hydrophobic core of each individual module identifies a cluster of residues forming a packing motif centered on Trp25 which appears to be characteristic for fibronectin type III modules. Comparison of the structure to that of the human growth hormone receptor, which belongs to a different class (class I) of the same cytokine receptor superfamily, shows that the structure of the individual domains is very similar but that the relative domain-domain orientation differs greatly. Even though the WSXWS box characteristic of the class I cytokine receptors is not present in tissue factor, the analogous residues have the identical polyproline helical conformation. Mapping of residues important for biological activity on the structure shows that all these are located on Beta-strands in a small number of distinct clusters, on the opposite side of the molecule compared to the ligand binding determinants of the growth hormone receptor.

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Year:  1996        PMID: 8609606     DOI: 10.1006/jmbi.1996.0073

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  24 in total

1.  Properties of spin and fluorescent labels at a receptor-ligand interface.

Authors:  R Owenius; M Osterlund; M Lindgren; M Svensson; O H Olsen; E Persson; P O Freskgård; U Carlsson
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  Loop dynamics of the extracellular domain of human tissue factor and activation of factor VIIa.

Authors:  Agnese S Minazzo; Reuben C Darlington; J B Alexander Ross
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

Review 3.  Overview of protein structural and functional folds.

Authors:  Peter D Sun; Christine E Foster; Jeffrey C Boyington
Journal:  Curr Protoc Protein Sci       Date:  2004-05

4.  Backbone 1H, 13C and 15N resonance assignments of the extracellular domain of tissue factor.

Authors:  John M Boettcher; Mary C Clay; Benjamin J LaHood; James H Morrissey; Chad M Rienstra
Journal:  Biomol NMR Assign       Date:  2010-06-06       Impact factor: 0.746

5.  LIF receptor-gp130 interaction investigated by homology modeling: implications for LIF binding.

Authors:  D K Smith; H R Treutlein
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

6.  Crystal structure of the agrin-responsive immunoglobulin-like domains 1 and 2 of the receptor tyrosine kinase MuSK.

Authors:  Amy L Stiegler; Steven J Burden; Stevan R Hubbard
Journal:  J Mol Biol       Date:  2006-09-12       Impact factor: 5.469

7.  Hinge bending within the cytokine receptor superfamily revealed by the 2.4 A crystal structure of the extracellular domain of rabbit tissue factor.

Authors:  Y A Muller; R F Kelley; A M de Vos
Journal:  Protein Sci       Date:  1998-05       Impact factor: 6.725

8.  Molecular modelling and experimental studies of mutation and cell-adhesion sites in the fibronectin type III and whey acidic protein domains of human anosmin-1.

Authors:  A Robertson; G S MacColl; J A Nash; M K Boehm; S J Perkins; P M Bouloux
Journal:  Biochem J       Date:  2001-08-01       Impact factor: 3.857

Review 9.  Interleukin-6: structure-function relationships.

Authors:  R J Simpson; A Hammacher; D K Smith; J M Matthews; L D Ward
Journal:  Protein Sci       Date:  1997-05       Impact factor: 6.725

10.  Tissue factor as a novel target for treatment of breast cancer.

Authors:  Marion Cole; Michael Bromberg
Journal:  Oncologist       Date:  2013-01-03
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