Literature DB >> 9605315

Hinge bending within the cytokine receptor superfamily revealed by the 2.4 A crystal structure of the extracellular domain of rabbit tissue factor.

Y A Muller1, R F Kelley, A M de Vos.   

Abstract

Tissue factor (TF), a member of the cytokine receptor superfamily, is the obligate cofactor of coagulation factor VIIa (FVIIa), and has a pivotal role in initiating the extrinsic pathway of blood coagulation through formation of the TF x FVIIa complex. The crystal structure of the extracellular portion of rabbit TF has been solved at 2.35 A resolution and refined to a crystallographic R-value of 19.1% (free R-value, 27.7%). Like the human homologue, the extracellular portion consists of two fibronectin type III domains connected by a short alpha-helical segment. Unexpectedly, the two molecules in the crystallographic asymmetric unit differ in their relative domain-domain orientation, revealing unsuspected hinge motion consisting of a rotation of about 12.7 degrees around an axis intersecting the linker segment at residue 106. Superposition of rabbit tissue factor with free and bound human tissue factor allows for the detection of an identical, albeit smaller, hinge motion in human TF induced upon binding of FVIIa. This raises the possibility that a very similar hinge axis may be present in other members of the cytokine receptor superfamily.

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Year:  1998        PMID: 9605315      PMCID: PMC2144006          DOI: 10.1002/pro.5560070504

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  29 in total

1.  Human tissue factor: cDNA sequence and chromosome localization of the gene.

Authors:  E M Scarpati; D Wen; G J Broze; J P Miletich; R R Flandermeyer; N R Siegel; J E Sadler
Journal:  Biochemistry       Date:  1987-08-25       Impact factor: 3.162

2.  Crystal structure of tandem type III fibronectin domains from Drosophila neuroglian at 2.0 A.

Authors:  A H Huber; Y M Wang; A J Bieber; P J Bjorkman
Journal:  Neuron       Date:  1994-04       Impact factor: 17.173

Review 3.  Hematopoietic receptor complexes.

Authors:  J A Wells; A M de Vos
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

4.  Structural design and molecular evolution of a cytokine receptor superfamily.

Authors:  J F Bazan
Journal:  Proc Natl Acad Sci U S A       Date:  1990-09       Impact factor: 11.205

5.  Crystal structure of a complex between interferon-gamma and its soluble high-affinity receptor.

Authors:  M R Walter; W T Windsor; T L Nagabhushan; D J Lundell; C A Lunn; P J Zauodny; S K Narula
Journal:  Nature       Date:  1995-07-20       Impact factor: 49.962

6.  A soluble tissue factor mutant is a selective anticoagulant and antithrombotic agent.

Authors:  R F Kelley; C J Refino; M P O'Connell; N Modi; P Sehl; D Lowe; C Pater; S Bunting
Journal:  Blood       Date:  1997-05-01       Impact factor: 22.113

7.  Structure of the extracellular domain of human tissue factor: location of the factor VIIa binding site.

Authors:  Y A Muller; M H Ultsch; R F Kelley; A M de Vos
Journal:  Biochemistry       Date:  1994-09-13       Impact factor: 3.162

Review 8.  Tissue factor: then and now.

Authors:  Y Nemerson
Journal:  Thromb Haemost       Date:  1995-07       Impact factor: 5.249

9.  The contributions of Ca2+, phospholipids and tissue-factor apoprotein to the activation of human blood-coagulation factor X by activated factor VII.

Authors:  V J Bom; R M Bertina
Journal:  Biochem J       Date:  1990-01-15       Impact factor: 3.857

10.  Crystal structure of the extracellular region of human tissue factor.

Authors:  K Harlos; D M Martin; D P O'Brien; E Y Jones; D I Stuart; I Polikarpov; A Miller; E G Tuddenham; C W Boys
Journal:  Nature       Date:  1994-08-25       Impact factor: 49.962

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  6 in total

Review 1.  Folding funnels, binding funnels, and protein function.

Authors:  C J Tsai; S Kumar; B Ma; R Nussinov
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

Review 2.  Folding and binding cascades: dynamic landscapes and population shifts.

Authors:  S Kumar; B Ma; C J Tsai; N Sinha; R Nussinov
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

Review 3.  Multiple diverse ligands binding at a single protein site: a matter of pre-existing populations.

Authors:  Buyong Ma; Maxim Shatsky; Haim J Wolfson; Ruth Nussinov
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

Review 4.  Tissue factor: a key molecule in hemostatic and nonhemostatic systems.

Authors:  James H Morrissey
Journal:  Int J Hematol       Date:  2004-02       Impact factor: 2.490

Review 5.  The role of dynamic conformational ensembles in biomolecular recognition.

Authors:  David D Boehr; Ruth Nussinov; Peter E Wright
Journal:  Nat Chem Biol       Date:  2009-11       Impact factor: 15.040

6.  Conformational Changes of Congenital FVII Variants with Defective Binding to Tissue Factor ARG304GLN (FVII Padua), ARG 304TRP (FVII Nagoya) and ARG79GLN (FVII Shinjo or Tondabayashi).

Authors:  Andrea Cristiani; Silvia Vettore; Luisa Sambado; Alessandro Bulfone; Stefano Moro; Antonio Girolami
Journal:  Int J Biomed Sci       Date:  2013-12
  6 in total

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