Literature DB >> 18429251

Overview of protein structural and functional folds.

Peter D Sun1, Christine E Foster, Jeffrey C Boyington.   

Abstract

This overview provides an illustrated, comprehensive survey of some commonly observed protein-fold families and structural motifs, chosen for their functional significance. It opens with descriptions and definitions of the various elements of protein structure and associated terminology. Following is an introduction into web-based structural bioinformatics that includes surveys of interactive web servers for protein fold or domain annotation, protein-structure databases, protein-structure-classification databases, structural alignments of proteins, and molecular graphics programs available for personal computers. The rest of the overview describes selected families of protein folds in terms of their secondary, tertiary, and quaternary structural arrangements, including ribbon-diagram examples, tables of representative structures with references, and brief explanations pointing out their respective biological and functional significance.

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Year:  2004        PMID: 18429251      PMCID: PMC7162418          DOI: 10.1002/0471140864.ps1701s35

Source DB:  PubMed          Journal:  Curr Protoc Protein Sci        ISSN: 1934-3655


  790 in total

1.  Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export.

Authors:  V Koronakis; A Sharff; E Koronakis; B Luisi; C Hughes
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

2.  The structure of the mammalian 20S proteasome at 2.75 A resolution.

Authors:  Masaki Unno; Tsunehiro Mizushima; Yukio Morimoto; Yoshikazu Tomisugi; Keiji Tanaka; Noritake Yasuoka; Tomitake Tsukihara
Journal:  Structure       Date:  2002-05       Impact factor: 5.006

3.  Structure of Mycobacterium tuberculosis chaperonin-10 at 3.5 A resolution.

Authors:  Bhupesh Taneja; Shekhar C Mande
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-01-24

4.  Crystal structure of the catalytic domain of the human cell cycle control phosphatase, Cdc25A.

Authors:  E B Fauman; J P Cogswell; B Lovejoy; W J Rocque; W Holmes; V G Montana; H Piwnica-Worms; M J Rink; M A Saper
Journal:  Cell       Date:  1998-05-15       Impact factor: 41.582

5.  Crystal structure of the interleukin-4/receptor alpha chain complex reveals a mosaic binding interface.

Authors:  T Hage; W Sebald; P Reinemer
Journal:  Cell       Date:  1999-04-16       Impact factor: 41.582

6.  Structure of the DNA-bound T-box domain of human TBX3, a transcription factor responsible for ulnar-mammary syndrome.

Authors:  Miquel Coll; Jonathan G Seidman; Christoph W Müller
Journal:  Structure       Date:  2002-03       Impact factor: 5.006

7.  Crystal structure of the zeta isoform of the 14-3-3 protein.

Authors:  D Liu; J Bienkowska; C Petosa; R J Collier; H Fu; R Liddington
Journal:  Nature       Date:  1995-07-13       Impact factor: 49.962

Review 8.  Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification.

Authors:  S K Hanks; T Hunter
Journal:  FASEB J       Date:  1995-05       Impact factor: 5.191

9.  Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.

Authors:  S Iwata; C Ostermeier; B Ludwig; H Michel
Journal:  Nature       Date:  1995-08-24       Impact factor: 49.962

Review 10.  The functions and consensus motifs of nine types of peptide segments that form different types of nucleotide-binding sites.

Authors:  T W Traut
Journal:  Eur J Biochem       Date:  1994-05-15
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  4 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

Review 2.  Recent Progress in Biopolymer-Based Hydrogel Materials for Biomedical Applications.

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Journal:  Int J Mol Sci       Date:  2022-01-26       Impact factor: 5.923

3.  Insight into the Conformational Transitions of Serine Acetyl Transferase Isoforms in E. histolytica: Implications for Structural and Functional Balance.

Authors:  Danish Idrees; Ahmad Abu Turab Naqvi; Md Imtaiyaz Hassan; Faizan Ahmad; Samudrala Gourinath
Journal:  ACS Omega       Date:  2022-07-07

Review 4.  Microscale Thermophoresis as a Tool to Study Protein Interactions and Their Implication in Human Diseases.

Authors:  Romain Magnez; Christian Bailly; Xavier Thuru
Journal:  Int J Mol Sci       Date:  2022-07-12       Impact factor: 6.208

  4 in total

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