Literature DB >> 8601279

Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D.

N J Watkins1, R D Leverette, L Xia, M T Andrews, E S Maxwell.   

Abstract

Essential elements for intronic U14 processing have been analyzed by microinjecting various mutant hsc70/Ul4 pre-mRNA precursors into Xenopus oocyte nuclei. Initial truncation experiments revealed that elements sufficient for U14 processing are located within the mature snoRNA sequence itself. Subsequent deletions within the U14 coding region demonstrated that only the terminal regions of the folded U14 molecule containing con- served nucleotide boxes C and D are required for processing. Mutagenesis of either box C or box D completely blocked U14 processing. The importance of boxes C and D was confirmed with the excision of appropriately sized U3 and U8 fragments containing boxes C and D from an hsc7O pre-mRNA intron. Competition studies indicate that a trans-acting factor (protein?) is binding this terminal motif and is essential for U14 processing. Competition studies also revealed that this factor is common to both intronic and non-intronic snoRNAs possessing nucleotide boxes C and D. Immunoprecipitation of full-length and internally deleted U14 snoRNA molecules demonstrated that the terminal region containing boxes C and D does not bind fibrillarin. Collectively, our results indicate that a trans-acting factor (different from fibrillarin) binds to the box C- and D-containing terminal motif of U14 snoRNA, thereby stabilizing the intronic snoRNA sequence in an RNP complex during processing.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 8601279      PMCID: PMC1369357     

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  40 in total

Review 1.  Novel intron-encoded small nucleolar RNAs.

Authors:  B Sollner-Webb
Journal:  Cell       Date:  1993-11-05       Impact factor: 41.582

2.  Isolation of U3 snoRNP from CHO cells: a novel 55 kDa protein binds to the central part of U3 snoRNA.

Authors:  B Lübben; C Marshallsay; N Rottmann; R Lührmann
Journal:  Nucleic Acids Res       Date:  1993-11-25       Impact factor: 16.971

3.  Retention and 5' cap trimethylation of U3 snRNA in the nucleus.

Authors:  M P Terns; J E Dahlberg
Journal:  Science       Date:  1994-05-13       Impact factor: 47.728

4.  Sequence and structural elements critical for U8 snRNP function in Xenopus oocytes are evolutionarily conserved.

Authors:  B A Peculis; J A Steitz
Journal:  Genes Dev       Date:  1994-09-15       Impact factor: 11.361

5.  Two different snoRNAs are encoded in introns of amphibian and human L1 ribosomal protein genes.

Authors:  S Prislei; A Michienzi; C Presutti; P Fragapane; I Bozzoni
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

6.  In vitro study of processing of the intron-encoded U16 small nucleolar RNA in Xenopus laevis.

Authors:  E Caffarelli; M Arese; B Santoro; P Fragapane; I Bozzoni
Journal:  Mol Cell Biol       Date:  1994-05       Impact factor: 4.272

7.  U17XS8, a small nucleolar RNA with a 12 nt complementarity to 18S rRNA and coded by a sequence repeated in the six introns of Xenopus laevis ribosomal protein S8 gene.

Authors:  F Cecconi; P Mariottini; F Loreni; P Pierandrei-Amaldi; N Campioni; F Amaldi
Journal:  Nucleic Acids Res       Date:  1994-03-11       Impact factor: 16.971

8.  Nuclear RNase MRP is required for correct processing of pre-5.8S rRNA in Saccharomyces cerevisiae.

Authors:  M E Schmitt; D A Clayton
Journal:  Mol Cell Biol       Date:  1993-12       Impact factor: 4.272

9.  A novel small nucleolar RNA (U16) is encoded inside a ribosomal protein intron and originates by processing of the pre-mRNA.

Authors:  P Fragapane; S Prislei; A Michienzi; E Caffarelli; I Bozzoni
Journal:  EMBO J       Date:  1993-07       Impact factor: 11.598

10.  Small nucleolar RNAs encoded by introns of the human cell cycle regulatory gene RCC1.

Authors:  T Kiss; W Filipowicz
Journal:  EMBO J       Date:  1993-07       Impact factor: 11.598

View more
  62 in total

1.  The Rev protein is able to transport to the cytoplasm small nucleolar RNAs containing a Rev binding element.

Authors:  S B Buonomo; A Michienzi; F G De Angelis; I Bozzoni
Journal:  RNA       Date:  1999-08       Impact factor: 4.942

2.  Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.

Authors:  T S Lange; M Ezrokhi; F Amaldi; S A Gerbi
Journal:  Mol Biol Cell       Date:  1999-11       Impact factor: 4.138

3.  Splicing-independent processing of plant box C/D and box H/ACA small nucleolar RNAs.

Authors:  D J Leader; G P Clark; J Watters; A F Beven; P J Shaw; J W Brown
Journal:  Plant Mol Biol       Date:  1999-04       Impact factor: 4.076

4.  Role of the box C/D motif in localization of small nucleolar RNAs to coiled bodies and nucleoli.

Authors:  A Narayanan; W Speckmann; R Terns; M P Terns
Journal:  Mol Biol Cell       Date:  1999-07       Impact factor: 4.138

5.  p62, a novel Xenopus laevis component of box C/D snoRNPs.

Authors:  D Filippini; I Bozzoni; E Caffarelli
Journal:  RNA       Date:  2000-03       Impact factor: 4.942

6.  Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability.

Authors:  D L Lafontaine; D Tollervey
Journal:  RNA       Date:  1999-03       Impact factor: 4.942

7.  The box C/D motif directs snoRNA 5'-cap hypermethylation.

Authors:  W A Speckmann; R M Terns; M P Terns
Journal:  Nucleic Acids Res       Date:  2000-11-15       Impact factor: 16.971

8.  Multiple snoRNA gene clusters from Arabidopsis.

Authors:  J W Brown; G P Clark; D J Leader; C G Simpson; T Lowe
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

Review 9.  The 3' end formation in small RNAs.

Authors:  Karthika Perumal; Ram Reddy
Journal:  Gene Expr       Date:  2002

Review 10.  Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.

Authors:  Michael P Terns; Rebecca M Terns
Journal:  Gene Expr       Date:  2002
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.