Literature DB >> 8139912

U17XS8, a small nucleolar RNA with a 12 nt complementarity to 18S rRNA and coded by a sequence repeated in the six introns of Xenopus laevis ribosomal protein S8 gene.

F Cecconi1, P Mariottini, F Loreni, P Pierandrei-Amaldi, N Campioni, F Amaldi.   

Abstract

U17XS8 RNA is a 220 nt small RNA coded by a sequence repeated in each of the six introns of the gene for ribosomal protein S8 of Xenopus laevis. It is mainly localized in the nucleolus, as shown by in situ hybridization, and it is assembled in a ribonucleoprotein particle (RNP) sedimenting at about 12S, slightly faster than U3 RNP, and with a density of 1.45 g/ml. DNA and RNA microinjections in Xenopus oocytes have shown that U17XS8 RNA is not the product of an independent transcription unit, but is produced by processing of intron sequences of r-protein S8 transcript, as has been recently shown for other small nucleolar RNAs encoded in the introns of other genes. Its accumulation during Xenopus development, oogenesis and embryogenesis, increases in parallel to that of r-protein S8 mRNA. Another interesting feature is the presence in the U17XS8 RNA of a 12 nt sequence complementary to 18S rRNA. The results presented suggest a possible role of this RNA in some step(s) of ribosome assembling in the nucleolus. Some relevant differences between Xenopus U17XS8 RNA and the corresponding human U17 RNA, recently described, have been observed.

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Year:  1994        PMID: 8139912      PMCID: PMC307876          DOI: 10.1093/nar/22.5.732

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  36 in total

1.  The U3 small nucleolar ribonucleoprotein functions in the first step of preribosomal RNA processing.

Authors:  S Kass; K Tyc; J A Steitz; B Sollner-Webb
Journal:  Cell       Date:  1990-03-23       Impact factor: 41.582

Review 2.  Expression of ribosomal protein genes and regulation of ribosome biosynthesis in Xenopus development.

Authors:  F Amaldi; I Bozzoni; E Beccari; P Pierandrei-Amaldi
Journal:  Trends Biochem Sci       Date:  1989-05       Impact factor: 13.807

3.  Oogenesis in Xenopus laevis (Daudin). I. Stages of oocyte development in laboratory maintained animals.

Authors:  J N Dumont
Journal:  J Morphol       Date:  1972-02       Impact factor: 1.804

4.  Nucleotide sequence of nucleolar U3B RNA.

Authors:  R Reddy; D Henning; H Busch
Journal:  J Biol Chem       Date:  1979-11-10       Impact factor: 5.157

5.  Isolation and nucleotide sequences of cDNAs for Xenopus laevis ribosomal protein S8: similarities in the 5' and 3' untranslated regions of mRNAs for various r-proteins.

Authors:  P Mariottini; C Bagni; F Annesi; F Amaldi
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

6.  Sequence of the gene coding for ribosomal protein S8 of Xenopus laevis.

Authors:  P Mariottini; C Bagni; A Francesconi; F Cecconi; M J Serra; Q M Chen; F Loreni; F Annesi; F Amaldi
Journal:  Gene       Date:  1993-10-15       Impact factor: 3.688

7.  Albumin phylogeny for clawed frogs (Xenopus).

Authors:  C A Bisbee; M A Baker; A C Wilson; I Haji-Azimi; M Fischberg
Journal:  Science       Date:  1977-02-25       Impact factor: 47.728

8.  The accumulation of mature RNA for the Xenopus laevis ribosomal protein L1 is controlled at the level of splicing and turnover of the precursor RNA.

Authors:  E Caffarelli; P Fragapane; C Gehring; I Bozzoni
Journal:  EMBO J       Date:  1987-11       Impact factor: 11.598

9.  In vivo disruption of Xenopus U3 snRNA affects ribosomal RNA processing.

Authors:  R Savino; S A Gerbi
Journal:  EMBO J       Date:  1990-07       Impact factor: 11.598

10.  U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus.

Authors:  K Tyc; J A Steitz
Journal:  EMBO J       Date:  1989-10       Impact factor: 11.598

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  20 in total

1.  Box H and box ACA are nucleolar localization elements of U17 small nucleolar RNA.

Authors:  T S Lange; M Ezrokhi; F Amaldi; S A Gerbi
Journal:  Mol Biol Cell       Date:  1999-11       Impact factor: 4.138

2.  Multiple conserved segments of E1 small nucleolar RNA are involved in the formation of a ribonucleoprotein particle in frog oocytes.

Authors:  D D Ruhl; M E Pusateri; G L Eliceiri
Journal:  Biochem J       Date:  2000-06-15       Impact factor: 3.857

3.  Structural and sequence evolution of U17 small nucleolar RNA (snoRNA) and its phylogenetic congruence in chelonians.

Authors:  Manuela Cervelli; Marco Oliverio; Alessandro Bellini; Marco Bologna; Francesco Cecconi; Paolo Mariottini
Journal:  J Mol Evol       Date:  2003-07       Impact factor: 2.395

4.  The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family.

Authors:  P Pelczar; W Filipowicz
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

5.  A functional role for some Fugu introns larger than the typical short ones: the example of the gene coding for ribosomal protein S7 and snoRNA U17.

Authors:  F Cecconi; C Crosio; P Mariottini; G Cesareni; M Giorgi; S Brenner; F Amaldi
Journal:  Nucleic Acids Res       Date:  1996-08-15       Impact factor: 16.971

6.  Three small nucleolar RNAs that are involved in ribosomal RNA precursor processing.

Authors:  R K Mishra; G L Eliceiri
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

7.  Intracellular localization and unique conserved sequences of three small nucleolar RNAs.

Authors:  N Selvamurugan; O H Joost; E S Haas; J W Brown; N J Galvin; G L Eliceiri
Journal:  Nucleic Acids Res       Date:  1997-04-15       Impact factor: 16.971

8.  Small nucleolar RNAs and nucleolar proteins in Xenopus anucleolate embryos.

Authors:  C Crosio; N Campioni; B Cardinali; F Amaldi; P Pierandrei-Amaldi
Journal:  Chromosoma       Date:  1997-06       Impact factor: 4.316

Review 9.  Aspects of regulation of ribosomal protein synthesis in Xenopus laevis. Review.

Authors:  P Pierandrei-Amaldi; F Amaldi
Journal:  Genetica       Date:  1994       Impact factor: 1.082

10.  The Xenopus intron-encoded U17 snoRNA is produced by exonucleolytic processing of its precursor in oocytes.

Authors:  F Cecconi; P Mariottini; F Amaldi
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

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