Literature DB >> 7507233

Two different snoRNAs are encoded in introns of amphibian and human L1 ribosomal protein genes.

S Prislei1, A Michienzi, C Presutti, P Fragapane, I Bozzoni.   

Abstract

We previously reported that the third intron of the X.laevis L1 ribosomal protein gene encodes for a snoRNA called U16. Here we show that four different introns of the same gene contain another previously uncharacterized snoRNA (U18) which is associated with fibrillarin in the nucleolus and which originates by processing of the pre-mRNA. The pathway of U18 RNA release from the pre-mRNA is the same as the one described for U16: primary endonucleolytic cleavages upstream and downstream of the U18 coding region produce a pre-U18 RNA which is subsequently trimmed to the mature form. Both the gene organization and processing of U18 are conserved in the corresponding genes of X.tropicalis and H.sapiens. The L1 gene thus has a composite structure, highly conserved in evolution, in which sequences coding for a ribosomal protein are intermingled with sequences coding for two different snoRNAs. The nucleolar localization of these different components suggests some common function on ribosome biosynthesis.

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Year:  1993        PMID: 7507233      PMCID: PMC310460          DOI: 10.1093/nar/21.25.5824

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

1.  A low-molecular-weight RNA from mouse ascites cells that hybridizes to both 18S rRNA and mRNA sequences.

Authors:  E S Maxwell; T E Martin
Journal:  Proc Natl Acad Sci U S A       Date:  1986-10       Impact factor: 11.205

2.  Xenopus laevis ribosomal protein genes: isolation of recombinant cDNA clones and study of the genomic organization.

Authors:  I Bozzoni; E Beccari; Z X Luo; F Amaldi
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

3.  Isolation and structural analysis of ribosomal protein genes in Xenopus laevis. Homology between sequences present in the gene and in several different messenger RNAs.

Authors:  I Bozzoni; A Tognoni; P Pierandrei-Amaldi; E Beccari; M Buongiorno-Nardelli; F Amaldi
Journal:  J Mol Biol       Date:  1982-11-05       Impact factor: 5.469

4.  Expression of two Xenopus laevis ribosomal protein genes in injected frog oocytes. A specific splicing block interferes with the L1 RNA maturation.

Authors:  I Bozzoni; P Fragapane; F Annesi; P Pierandrei-Amaldi; F Amaldi; E Beccari
Journal:  J Mol Biol       Date:  1984-12-25       Impact factor: 5.469

5.  Complementarity of conserved sequence elements present in 28S ribosomal RNA and in ribosomal protein genes of Xenopus laevis and Xenopus tropicalis.

Authors:  F Cutruzzolá; F Loreni; I Bozzoni
Journal:  Gene       Date:  1986       Impact factor: 3.688

6.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

7.  Localization of the nucleolar protein NO38 in amphibian oocytes.

Authors:  B A Peculis; J G Gall
Journal:  J Cell Biol       Date:  1992-01       Impact factor: 10.539

8.  The yeast homologue of U3 snRNA.

Authors:  J M Hughes; D A Konings; G Cesareni
Journal:  EMBO J       Date:  1987-07       Impact factor: 11.598

9.  Nucleotide sequence of the L1 ribosomal protein gene of Xenopus laevis: remarkable sequence homology among introns.

Authors:  F Loreni; I Ruberti; I Bozzoni; P Pierandrei-Amaldi; F Amaldi
Journal:  EMBO J       Date:  1985-12-16       Impact factor: 11.598

10.  Xenopus laevis U1 snRNA genes: characterisation of transcriptionally active genes reveals major and minor repeated gene families.

Authors:  R Zeller; M T Carri; I W Mattaj; E M De Robertis
Journal:  EMBO J       Date:  1984-05       Impact factor: 11.598

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  22 in total

1.  Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities.

Authors:  T Villa; F Ceradini; C Presutti; I Bozzoni
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

2.  Compilation of small RNA sequences.

Authors:  J Gu; R Reddy
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

3.  Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes.

Authors:  C M Smith; J A Steitz
Journal:  Mol Cell Biol       Date:  1998-12       Impact factor: 4.272

4.  Processing of the precursors to small nucleolar RNAs and rRNAs requires common components.

Authors:  E Petfalski; T Dandekar; Y Henry; D Tollervey
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

5.  Identification of specific nucleotide sequences and structural elements required for intronic U14 snoRNA processing.

Authors:  L Xia; N J Watkins; E S Maxwell
Journal:  RNA       Date:  1997-01       Impact factor: 4.942

6.  Genetic and molecular analysis of spe-27, a gene required for spermiogenesis in Caenorhabditis elegans hermaphrodites.

Authors:  A N Minniti; C Sadler; S Ward
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

7.  Identification of a novel element required for processing of intron-encoded box C/D small nucleolar RNAs in Saccharomyces cerevisiae.

Authors:  T Villa; F Ceradini; I Bozzoni
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

8.  Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D.

Authors:  N J Watkins; R D Leverette; L Xia; M T Andrews; E S Maxwell
Journal:  RNA       Date:  1996-02       Impact factor: 4.942

Review 9.  Aspects of regulation of ribosomal protein synthesis in Xenopus laevis. Review.

Authors:  P Pierandrei-Amaldi; F Amaldi
Journal:  Genetica       Date:  1994       Impact factor: 1.082

10.  The Xenopus intron-encoded U17 snoRNA is produced by exonucleolytic processing of its precursor in oocytes.

Authors:  F Cecconi; P Mariottini; F Amaldi
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

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