Literature DB >> 8594610

Database on the structure of large ribosomal subunit RNA.

P De Rijk1, Y Van de Peer, R De Wachter.   

Abstract

Our database on large ribosomal subunit RNA contained 334 sequences in July, 1995. All sequences in the database are aligned, taking into account secondary structure. The aligned sequences are provided, together with incorporated secondary structure information, in several computer-readable formats. These data can easily be obtained through the World Wide Web. The files in the database are also available via anonymous ftp.

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Year:  1996        PMID: 8594610      PMCID: PMC145594          DOI: 10.1093/nar/24.1.92

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Identification of lactococci and enterococci by colony hybridization with 23S rRNA-targeted oligonucleotide probes.

Authors:  D Betzl; W Ludwig; K H Schleifer
Journal:  Appl Environ Microbiol       Date:  1990-09       Impact factor: 4.792

Review 2.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

3.  DCSE, an interactive tool for sequence alignment and secondary structure research.

Authors:  P De Rijk; R De Wachter
Journal:  Comput Appl Biosci       Date:  1993-12

Review 4.  Ribosomal RNA: a key to phylogeny.

Authors:  G J Olsen; C R Woese
Journal:  FASEB J       Date:  1993-01       Impact factor: 5.191

Review 5.  The winds of (evolutionary) change: breathing new life into microbiology.

Authors:  G J Olsen; C R Woese; R Overbeek
Journal:  J Bacteriol       Date:  1994-01       Impact factor: 3.490

6.  TREECON: a software package for the construction and drawing of evolutionary trees.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1993-04

7.  A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993.

Authors:  R R Gutell; M W Gray; M N Schnare
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

8.  The EMBL data library.

Authors:  C M Rice; R Fuchs; D G Higgins; P J Stoehr; G N Cameron
Journal:  Nucleic Acids Res       Date:  1993-07-01       Impact factor: 16.971

9.  Evolutionary relationships amongst archaebacteria. A comparative study of 23 S ribosomal RNAs of a sulphur-dependent extreme thermophile, an extreme halophile and a thermophilic methanogen.

Authors:  H Leffers; J Kjems; L Ostergaard; N Larsen; R A Garrett
Journal:  J Mol Biol       Date:  1987-05-05       Impact factor: 5.469

10.  Detection of Pseudomonas pseudomallei by PCR and hybridization.

Authors:  A E Lew; P M Desmarchelier
Journal:  J Clin Microbiol       Date:  1994-05       Impact factor: 5.948

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  9 in total

1.  A quantitative map of nucleotide substitution rates in bacterial rRNA.

Authors:  Y Van de Peer; S Chapelle; R De Wachter
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971

2.  Complete large subunit ribosomal RNA sequences from the heterokont algae Ochromonas danica, Nannochloropsis salina, and Tribonema aequale, and phylogenetic analysis.

Authors:  G Van der Auwera; R De Wachter
Journal:  J Mol Evol       Date:  1997-07       Impact factor: 2.395

Review 3.  Flow cytometry and cell sorting of heterogeneous microbial populations: the importance of single-cell analyses.

Authors:  H M Davey; D B Kell
Journal:  Microbiol Rev       Date:  1996-12

4.  Database on the structure of large ribosomal subunit RNA.

Authors:  P De Rijk; Y Van de Peer; R De Wachter
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

5.  Obligate intracellular bacterial parasites of acanthamoebae related to Chlamydia spp.

Authors:  R Amann; N Springer; W Schönhuber; W Ludwig; E N Schmid; K D Müller; R Michel
Journal:  Appl Environ Microbiol       Date:  1997-01       Impact factor: 4.792

6.  Three-dimensional structure of the yeast ribosome.

Authors:  A Verschoor; J R Warner; S Srivastava; R A Grassucci; J Frank
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

7.  In situ detection of novel bacterial endosymbionts of Acanthamoeba spp. phylogenetically related to members of the order Rickettsiales.

Authors:  T R Fritsche; M Horn; S Seyedirashti; R K Gautom; K H Schleifer; M Wagner
Journal:  Appl Environ Microbiol       Date:  1999-01       Impact factor: 4.792

8.  Morphological and biochemical properties of a Sphaerotilus sp. Isolated from paper mill slimes.

Authors:  V Pellegrin; S Juretschko; M Wagner; G Cottenceau
Journal:  Appl Environ Microbiol       Date:  1999-01       Impact factor: 4.792

9.  Redescription of the female, description of the male, and several new records of Amblyomma parkeri (Acari: Ixodidae), a South American tick species.

Authors:  Marcelo B Labruna; Valeria C Onofrio; Lorenza Beati; Márcia Arzua; Patricia B Bertola; Alberto F Ribeiro; Darci M Barros-Battesti
Journal:  Exp Appl Acarol       Date:  2009-02-25       Impact factor: 2.132

  9 in total

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