Literature DB >> 8587115

On the origin and evolution of the genetic code.

A Jiménez-Sánchez1.   

Abstract

Two ideas have essentially been used to explain the origin of the genetic code: Crick's frozen accident and Woese's amino acid-codon specific chemical interaction. Whatever the origin and codon-amino acid correlation, it is difficult to imagine the sudden appearance of the genetic code in its present form of 64 codons coding for 20 amino acids without appealing to some evolutionary process. On the contrary, it is more reasonable to assume that it evolved from a much simpler initial state in which a few triplets were coding for each of a small number of amino acids. Analysis of genetic code through information theory and the metabolism of pyrimidine biosynthesis provide evidence that suggests that the genetic code could have begun in an RNA world with the two letters A and U grouped in eight triplets coding for seven amino acids and one stop signal. This code could have progressively evolved by making gradual use of letters G and C to end with 64 triplets coding for 20 amino acids and three stop signals. According to proposed evidence, DNA could have appeared after the four-letter structure was already achieved. In the newborn DNA world, T substituted U to get higher physicochemical and genetic stability.

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Year:  1995        PMID: 8587115     DOI: 10.1007/bf00173149

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  17 in total

1.  The evolution of a universal genetic code.

Authors:  J T Wong
Journal:  Proc Natl Acad Sci U S A       Date:  1976-07       Impact factor: 11.205

2.  Speculations on the early course of evolution.

Authors:  J E Darnell; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

Review 3.  Evolutionary changes in the genetic code.

Authors:  S Osawa; A Muto; T H Jukes; T Ohama
Journal:  Proc Biol Sci       Date:  1990-07-23       Impact factor: 5.349

Review 4.  Catalytic RNA and the origin of genetic systems.

Authors:  A I Lamond; T J Gibson
Journal:  Trends Genet       Date:  1990-05       Impact factor: 11.639

5.  Codon reassignment (codon capture) in evolution.

Authors:  S Osawa; T H Jukes
Journal:  J Mol Evol       Date:  1989-04       Impact factor: 2.395

6.  RNA evolution and the origins of life.

Authors:  G F Joyce
Journal:  Nature       Date:  1989-03-16       Impact factor: 49.962

7.  Prebiotic synthesis of hydrophobic and protein amino acids.

Authors:  D Ring; Y Wolman; N Friedmann; S L Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1972-03       Impact factor: 11.205

Review 8.  Three stages in the evolution of the genetic code.

Authors:  U Baumann; J Oro
Journal:  Biosystems       Date:  1993       Impact factor: 1.973

9.  The genetic code as a periodic table.

Authors:  J R Jungck
Journal:  J Mol Evol       Date:  1978-08-02       Impact factor: 2.395

10.  An RNA-amino acid complex and the origin of the genetic code.

Authors:  M Yarus
Journal:  New Biol       Date:  1991-02
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  13 in total

Review 1.  Origins of gene, genetic code, protein and life: comprehensive view of life systems from a GNC-SNS primitive genetic code hypothesis.

Authors:  K Ikehara
Journal:  J Biosci       Date:  2002-03       Impact factor: 1.826

Review 2.  The case for an error minimizing standard genetic code.

Authors:  Stephen J Freeland; Tao Wu; Nick Keulmann
Journal:  Orig Life Evol Biosph       Date:  2003-10       Impact factor: 1.950

3.  Artificially ambiguous genetic code confers growth yield advantage.

Authors:  V Pezo; D Metzgar; T L Hendrickson; W F Waas; S Hazebrouck; V Döring; P Marlière; P Schimmel; V De Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-26       Impact factor: 11.205

4.  A new classification scheme of the genetic code.

Authors:  Thomas Wilhelm; Svetlana Nikolajewa
Journal:  J Mol Evol       Date:  2004-11       Impact factor: 2.395

5.  Inhibited cell growth and protein functional changes from an editing-defective tRNA synthetase.

Authors:  Jamie M Bacher; Valérie de Crécy-Lagard; Paul R Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-12       Impact factor: 11.205

6.  Evolution of the genetic code by incorporation of amino acids that improved or changed protein function.

Authors:  Brian R Francis
Journal:  J Mol Evol       Date:  2013-06-07       Impact factor: 2.395

7.  The Standard Genetic Code can Evolve from a Two-Letter GC Code Without Information Loss or Costly Reassignments.

Authors:  Alejandro Frank; Tom Froese
Journal:  Orig Life Evol Biosph       Date:  2018-06-29       Impact factor: 1.950

Review 8.  Emergence and evolution.

Authors:  Tammy J Bullwinkle; Michael Ibba
Journal:  Top Curr Chem       Date:  2014

9.  A model-independent approach to infer hierarchical codon substitution dynamics.

Authors:  Olof Görnerup; Martin Nilsson Jacobi
Journal:  BMC Bioinformatics       Date:  2010-04-23       Impact factor: 3.169

10.  Genome wide exploration of the origin and evolution of amino acids.

Authors:  Xiaoxia Liu; Jingxian Zhang; Feng Ni; Xu Dong; Bucong Han; Daxiong Han; Zhiliang Ji; Yufen Zhao
Journal:  BMC Evol Biol       Date:  2010-03-15       Impact factor: 3.260

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