Literature DB >> 8528088

Influence of divalent cations in protein crystallization.

S Trakhanov1, F A Quiocho.   

Abstract

We have tested the effect of several cations in attempts to crystallize the ligand-bound forms of the leucine/isoleucine/valine-binding protein (LIVBP) (M(r) = 36,700) and leucine-specific binding protein (LBP) (M(r) = 37,000), which act as initial periplasmic receptors for the high-affinity osmotic-shock-sensitive active transport system in bacterial cells. Success was achieved with Cd2+ promoting the most dramatic improvement in crystal size, morphology, and diffraction quality. This comes about 15 years after the ligand-free proteins were crystallized. Nine other different divalent cations were tried as additives in the crystallization of LIVBP with polyethylene glycol 8000 as precipitant, and each showed different effects on the crystal quality and morphology. Cd2+ produced large hexagonal prism crystals of LIVBP, whereas a majority of the cations resulted in less desirable needle-shaped crystals. Zn2+ gave crystals that are long rods with hexagonal cross sections, a shape intermediate between the hexagonal prism and needle forms. The concentration of Cd2+ is critical. The best crystals of the LIVBP were obtained in the presence of 1 mM CdCl2, whereas those of LBP, with trigonal prism morphology, were obtained at a much higher concentration of 100 mM. Both crystals diffract to at least 1.7 A resolution using a conventional X-ray source.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 8528088      PMCID: PMC2143217          DOI: 10.1002/pro.5560040925

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  21 in total

1.  Structure of the L-leucine-binding protein refined at 2.4 A resolution and comparison with the Leu/Ile/Val-binding protein structure.

Authors:  J S Sack; S D Trakhanov; I H Tsigannik; F A Quiocho
Journal:  J Mol Biol       Date:  1989-03-05       Impact factor: 5.469

2.  Preliminary crystallographic data for a leucine, isoleucine, valine-binding protein from Escherichia coli K12.

Authors:  W E Meador; F A Quiocho
Journal:  J Mol Biol       Date:  1978-08-15       Impact factor: 5.469

3.  Purification and properties of a leucine-binding protein from Escherichia coli.

Authors:  W R Penrose; G E Nichoalds; J R Piperno; D L Oxender
Journal:  J Biol Chem       Date:  1968-11-25       Impact factor: 5.157

4.  Binding proteins and membrane transport.

Authors:  D L Oxender; S Quay
Journal:  Ann N Y Acad Sci       Date:  1975-12-30       Impact factor: 5.691

5.  New crystal forms and preliminary X-ray diffraction studies of mitochondrial cytochrome bc1 complex from bovine heart.

Authors:  M Kawamoto; T Kubota; T Matsunaga; K Fukuyama; H Matsubara; K Shinzawa-Itoh; S Yoshikawa
Journal:  J Mol Biol       Date:  1994-11-25       Impact factor: 5.469

6.  Leucine, isoleucine, valine-binding protein from Escherichia coli. Structure at 3.0-A resolution and location of the binding site.

Authors:  M A Saper; F A Quiocho
Journal:  J Biol Chem       Date:  1983-09-25       Impact factor: 5.157

7.  Crystallization of and preliminary X-ray data for the plasma retinol-binding protein.

Authors:  M E Newcomer; A Liljas; J Sundelin; L Rask; P A Peterson
Journal:  J Biol Chem       Date:  1984-04-25       Impact factor: 5.157

8.  The complete nucleotide sequences of the Escherichia coli LIV-BP and LS-BP genes. Implications for the mechanism of high-affinity branched-chain amino acid transport.

Authors:  R Landick; D L Oxender
Journal:  J Biol Chem       Date:  1985-07-15       Impact factor: 5.157

9.  Crystallization of and preliminary X-ray data for an intracellular vitamin A-binding protein from rat liver.

Authors:  M E Newcomer; A Liljas; U Eriksson; J Sundelin; L Rask; P A Peterson
Journal:  J Biol Chem       Date:  1981-08-10       Impact factor: 5.157

10.  An experiment regarding crystallization of soluble proteins in the presence of beta-octyl glucoside.

Authors:  A McPherson; S Koszelak; H Axelrod; J Day; R Williams; L Robinson; M McGrath; D Cascio
Journal:  J Biol Chem       Date:  1986-02-05       Impact factor: 5.157

View more
  20 in total

1.  Crystal structure of the C-terminal half of tropomodulin and structural basis of actin filament pointed-end capping.

Authors:  Inna Krieger; Alla Kostyukova; Atsuko Yamashita; Yasushi Nitanai; Yuichiro Maéda
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

2.  Amino acids and glycine ethyl ester as new crystallization reagents for lysozyme.

Authors:  Len Ito; Kentaro Shiraki; Hiroshi Yamaguchi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-05-27

3.  Rationalizing alpha-helical membrane protein crystallization.

Authors:  Simon Newstead; Sébastien Ferrandon; So Iwata
Journal:  Protein Sci       Date:  2008-01-24       Impact factor: 6.725

4.  Optimized solubilization of TRIzol-precipitated protein permits Western blotting analysis to maximize data available from brain tissue.

Authors:  Ashley M Kopec; Phillip D Rivera; Michael J Lacagnina; Richa Hanamsagar; Staci D Bilbo
Journal:  J Neurosci Methods       Date:  2017-02-13       Impact factor: 2.390

5.  Polymorphic Protein Crystal Growth: Influence of Hydration and Ions in Glucose Isomerase.

Authors:  C M Gillespie; D Asthagiri; A M Lenhoff
Journal:  Cryst Growth Des       Date:  2014-01-02       Impact factor: 4.076

6.  Preliminary structural studies on the multi-ligand-binding domain of the transcription activator, BmrR, from Bacillus subtilis.

Authors:  E E Zheleznova; P N Markham; A A Neyfakh; R G Brennan
Journal:  Protein Sci       Date:  1997-11       Impact factor: 6.725

Review 7.  Can the propensity of protein crystallization be increased by using systematic screening with metals?

Authors:  Raghurama P Hegde; Gowribidanur C Pavithra; Debayan Dey; Steven C Almo; S Ramakumar; Udupi A Ramagopal
Journal:  Protein Sci       Date:  2017-06-29       Impact factor: 6.725

8.  Three-dimensional model of the extracellular domain of the type 4a metabotropic glutamate receptor: new insights into the activation process.

Authors:  A S Bessis; H O Bertrand; T Galvez; C De Colle; J P Pin; F Acher
Journal:  Protein Sci       Date:  2000-11       Impact factor: 6.725

9.  Current trends in α-helical membrane protein crystallization: an update.

Authors:  Joanne L Parker; Simon Newstead
Journal:  Protein Sci       Date:  2012-08-10       Impact factor: 6.725

10.  The macromolecular complex of ICP and falcipain-2 from Plasmodium: preparation, crystallization and preliminary X-ray diffraction analysis.

Authors:  Guido Hansen; Britta Schwarzloh; Annika Rennenberg; Volker T Heussler; Rolf Hilgenfeld
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.