Literature DB >> 8413189

TdcA, a transcriptional activator of the tdcABC operon of Escherichia coli, is a member of the LysR family of proteins.

Y L Ganduri1, S R Sadda, M W Datta, R K Jambukeswaran, P Datta.   

Abstract

The tdcB and tdcC genes of the tdcABC operon of Escherichia coli encode threonine dehydratase and a threonine-serine permease, respectively. These proteins are involved in transport and metabolism of threonine and serine during anaerobic growth. In this study, we functionally characterized tdcA, which encodes a 35 kDa polypeptide consisting of 312 amino acid residues. Non-polar and partially polar mutations introduced into tdcA drastically reduced the expression of the genes down-stream from tdcA. Complementation studies using single-copy chromosomal integrants of a tdcB-lacZ fusion harboring an in-frame deletion of tdcA with chromosomal or plasmid-borne tdcA+ in trans showed complete restoration of tdc operon expression in vivo. The amino acid sequence at the amino-terminal end of TdcA revealed a significant homology to the helix-turn-helix motifs of typical DNA binding proteins. Sequence alignment of TdcA with LysR also showed considerable sequence similarity throughout their entire lengths. Our results suggest that TdcA is related to the LysR family of proteins by common ancestry and, based on its functional role in tdc expression, belongs to the LysR family of transcriptional activators.

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Year:  1993        PMID: 8413189     DOI: 10.1007/bf00280391

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  24 in total

1.  Identification and DNA sequence of tdcR, a positive regulatory gene of the tdc operon of Escherichia coli.

Authors:  H P Schweizer; P Datta
Journal:  Mol Gen Genet       Date:  1989-09

2.  Genetic analysis of the tdcABC operon of Escherichia coli K-12.

Authors:  H P Schweizer; P Datta
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

3.  Molecular characterization of the tdc operon of Escherichia coli K-12.

Authors:  T J Goss; H P Schweizer; P Datta
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

4.  A novel membrane-associated threonine permease encoded by the tdcC gene of Escherichia coli.

Authors:  V N Sumantran; H P Schweizer; P Datta
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

5.  A large family of bacterial activator proteins.

Authors:  S Henikoff; G W Haughn; J M Calvo; J C Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

6.  Systematic method for the detection of potential lambda Cro-like DNA-binding regions in proteins.

Authors:  I B Dodd; J B Egan
Journal:  J Mol Biol       Date:  1987-04-05       Impact factor: 5.469

7.  Mutations in the DNA gyrB gene that are temperature sensitive for lambda site-specific recombination, Mu growth, and plasmid maintenance.

Authors:  D I Friedman; L C Plantefaber; E J Olson; D Carver; M H O'Dea; M Gellert
Journal:  J Bacteriol       Date:  1984-02       Impact factor: 3.490

8.  Covalent structure of biodegradative threonine dehydratase of Escherichia coli: homology with other dehydratases.

Authors:  P Datta; T J Goss; J R Omnaas; R V Patil
Journal:  Proc Natl Acad Sci U S A       Date:  1987-01       Impact factor: 11.205

9.  Catabolite gene activator protein and integration host factor act in concert to regulate tdc operon expression in Escherichia coli.

Authors:  Y Wu; R V Patil; P Datta
Journal:  J Bacteriol       Date:  1992-11       Impact factor: 3.490

10.  Regulation of diaminopimelate decarboxylase synthesis in Escherichia coli. III. Nucleotide sequence and regulation of the lysR gene.

Authors:  P Stragier; J C Patte
Journal:  J Mol Biol       Date:  1983-08-05       Impact factor: 5.469

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  15 in total

1.  Identification of genes induced in vivo during Klebsiella pneumoniae CG43 infection.

Authors:  Y C Lai; H L Peng; H Y Chang
Journal:  Infect Immun       Date:  2001-11       Impact factor: 3.441

Review 2.  Structure and function of enzymes involved in the anaerobic degradation of L-threonine to propionate.

Authors:  Dhirendra K Simanshu; Sagar Chittori; H S Savithri; M R N Murthy
Journal:  J Biosci       Date:  2007-09       Impact factor: 1.826

Review 3.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

4.  Windowed Granger causal inference strategy improves discovery of gene regulatory networks.

Authors:  Justin D Finkle; Jia J Wu; Neda Bagheri
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-12       Impact factor: 11.205

5.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of propionate kinase (TdcD) from Salmonella typhimurium.

Authors:  Dhirendra K Simanshu; M R N Murthy
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2004-10-23

6.  Influence of DNA topology on expression of the tdc operon in Escherichia coli K-12.

Authors:  Y Wu; P Datta
Journal:  Mol Gen Genet       Date:  1995-06-25

7.  Functional analysis of the tdcABC promoter of Escherichia coli: roles of TdcA and TdcR.

Authors:  B T Hagewood; Y L Ganduri; P Datta
Journal:  J Bacteriol       Date:  1994-10       Impact factor: 3.490

8.  Characterization of mutations that allow p-aminobenzoyl-glutamate utilization by Escherichia coli.

Authors:  M J Hussein; J M Green; B P Nichols
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

9.  Genome-wide screening of genes whose enhanced expression affects glycogen accumulation in Escherichia coli.

Authors:  Gustavo Eydallin; Manuel Montero; Goizeder Almagro; María Teresa Sesma; Alejandro M Viale; Francisco José Muñoz; Mehdi Rahimpour; Edurne Baroja-Fernández; Javier Pozueta-Romero
Journal:  DNA Res       Date:  2010-01-29       Impact factor: 4.458

10.  Involvement of Fnr and ArcA in anaerobic expression of the tdc operon of Escherichia coli.

Authors:  S Chattopadhyay; Y Wu; P Datta
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

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