Literature DB >> 16508089

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of propionate kinase (TdcD) from Salmonella typhimurium.

Dhirendra K Simanshu1, M R N Murthy.   

Abstract

In the cell, propionate is mainly formed during beta-oxidation of odd-numbered carbon-chain fatty acids, fermentation of carbohydrates and degradation of the amino acids threonine, valine, isoleucine and methionine. Recently, it has been shown that L-threonine is non-oxidatively cleaved to propionate via 2-ketobutyrate. The last step in this process, conversion of propionyl phosphate and ADP to propionate and ATP, is catalysed by propionate kinase (EC 2.7.1.-). Here, the cloning of propionate kinase (molecular weight 44 kDa) from Salmonella typhimurium with an N-terminal hexahistidine affinity tag and its overexpression in Escherichia coli are reported. Purified propionate kinase was found to cocrystallize with ADP in the hanging-drop vapour-diffusion and microbatch methods. Crystals belong to space group P3(1)21 or P3(2)21, with unit-cell parameters a = b = 111.47, c = 66.52 A. A complete data set to 2.2 A resolution has been collected using an image-plate detector system mounted on a rotating-anode X-ray generator.

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Year:  2004        PMID: 16508089      PMCID: PMC1952409          DOI: 10.1107/S1744309104026429

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  A novel mechanism controls anaerobic and catabolite regulation of the Escherichia coli tdc operon.

Authors:  G Sawers
Journal:  Mol Microbiol       Date:  2001-03       Impact factor: 3.501

2.  Stereochemical course of phosphokinases. The use of adenosine [gamma-(S)-16O,17O,18O]triphosphate and the mechanistic consequences for the reactions catalyzed by glycerol kinase, hexokinase, pyruvate kinase, and acetate kinase.

Authors:  W A Blättler; J R Knowles
Journal:  Biochemistry       Date:  1979-09-04       Impact factor: 3.162

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Authors:  H P Schweizer; P Datta
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

4.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  Isolation and characterization of homogeneous acetate kinase from Salmonella typhimurium and Escherichia coli.

Authors:  D K Fox; S Roseman
Journal:  J Biol Chem       Date:  1986-10-15       Impact factor: 5.157

6.  A novel membrane-associated threonine permease encoded by the tdcC gene of Escherichia coli.

Authors:  V N Sumantran; H P Schweizer; P Datta
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

7.  Evidence for the formation of a gamma-phosphorylated glutamyl residue in the Escherichia coli acetate kinase reaction.

Authors:  J A Todhunter; D L Purich
Journal:  Biochem Biophys Res Commun       Date:  1974-09-09       Impact factor: 3.575

8.  Involvement of ack-pta operon products in alpha-ketobutyrate metabolism by Salmonella typhimurium.

Authors:  T K Van Dyk; R A LaRossa
Journal:  Mol Gen Genet       Date:  1987-05

9.  Urkinase: structure of acetate kinase, a member of the ASKHA superfamily of phosphotransferases.

Authors:  K A Buss; D R Cooper; C Ingram-Smith; J G Ferry; D A Sanders; M S Hasson
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

10.  Covalent structure of biodegradative threonine dehydratase of Escherichia coli: homology with other dehydratases.

Authors:  P Datta; T J Goss; J R Omnaas; R V Patil
Journal:  Proc Natl Acad Sci U S A       Date:  1987-01       Impact factor: 11.205

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  1 in total

1.  Cloning, expression, and characterization of an acetate kinase from a high rate of biohydrogen bacterial strain Ethanoligenens sp. hit B49.

Authors:  Nan-qi Ren; Hai-long Lin; Kun Zhang; Guo-xiang Zheng; Zhi-jie Duan; Ming Lin
Journal:  Curr Microbiol       Date:  2007-07-04       Impact factor: 2.343

  1 in total

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