Literature DB >> 17954980

Structure and function of enzymes involved in the anaerobic degradation of L-threonine to propionate.

Dhirendra K Simanshu1, Sagar Chittori, H S Savithri, M R N Murthy.   

Abstract

In Escherichia coli and Salmonella typhimurium, L-threonine is cleaved non-oxidatively to propionate via 2-ketobutyrate by biodegradative threonine deaminase, 2-ketobutyrate formate-lyase (or pyruvate formate-lyase), phosphotransacetylase and propionate kinase. In the anaerobic condition, L-threonine is converted to the energy-rich keto acid and this is subsequently catabolised to produce ATP via substrate-level phosphorylation, providing a source of energy to the cells. Most of the enzymes involved in the degradation of L-threonine to propionate are encoded by the anaerobically regulated tdc operon. In the recent past, extensive structural and biochemical studies have been carried out on these enzymes by various groups. Besides detailed structural and functional insights, these studies have also shown the similarities and differences between the other related enzymes present in the metabolic network. In this paper, we review the structural and biochemical studies carried out on these enzymes.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17954980     DOI: 10.1007/s12038-007-0121-1

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  63 in total

1.  The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase.

Authors:  M Y Galperin; N V Grishin
Journal:  Proteins       Date:  2000-11-01

2.  Stereochemical course of phosphokinases. The use of adenosine [gamma-(S)-16O,17O,18O]triphosphate and the mechanistic consequences for the reactions catalyzed by glycerol kinase, hexokinase, pyruvate kinase, and acetate kinase.

Authors:  W A Blättler; J R Knowles
Journal:  Biochemistry       Date:  1979-09-04       Impact factor: 3.162

3.  Steady-state kinetic analysis of phosphotransacetylase from Methanosarcina thermophila.

Authors:  Sarah H Lawrence; James G Ferry
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

4.  Identification and DNA sequence of tdcR, a positive regulatory gene of the tdc operon of Escherichia coli.

Authors:  H P Schweizer; P Datta
Journal:  Mol Gen Genet       Date:  1989-09

5.  Structure and mechanism of the glycyl radical enzyme pyruvate formate-lyase.

Authors:  A Becker; K Fritz-Wolf; W Kabsch; J Knappe; S Schultz; A F Volker Wagner
Journal:  Nat Struct Biol       Date:  1999-10

6.  The mechanism of action of 5'-adenylic acid-activated threonine dehydrase. V. Relation between ligand-induced allosteric activation and the protomeroligomer interconversion.

Authors:  J A Gerlt; K W Rabinowitz; C P Dunne; W A Wood
Journal:  J Biol Chem       Date:  1973-12-10       Impact factor: 5.157

7.  Phosphotransacetylase of Escherichia coli B, activation by pyruvate and inhibition by NADH and certain nucleotides.

Authors:  T Suzuki
Journal:  Biochim Biophys Acta       Date:  1969

8.  The mechanism of action of 5'-adenylic acid-activated threonine dehydrase. 3. Structural requirements for nucleotide allosteric activation.

Authors:  K W Rabinowitz; J D Shada; W A Wood
Journal:  J Biol Chem       Date:  1968-06-25       Impact factor: 5.157

9.  Crystal structures of a phosphotransacetylase from Bacillus subtilis and its complex with acetyl phosphate.

Authors:  Qian Steven Xu; Jarmila Jancarik; Yun Lou; Kate Kuznetsova; Alexander F Yakunin; Hisao Yokota; Paul Adams; Rosalind Kim; Sung-Hou Kim
Journal:  J Struct Funct Genomics       Date:  2005-11-09

10.  The free radical of pyruvate formate-lyase. Characterization by EPR spectroscopy and involvement in catalysis as studied with the substrate-analogue hypophosphite.

Authors:  V Unkrig; F A Neugebauer; J Knappe
Journal:  Eur J Biochem       Date:  1989-10-01
View more
  7 in total

1.  MRA_1571 is required for isoleucine biosynthesis and improves Mycobacterium tuberculosis H37Ra survival under stress.

Authors:  Rishabh Sharma; Deepa Keshari; Kumar Sachin Singh; Shailendra Yadav; Sudheer Kumar Singh
Journal:  Sci Rep       Date:  2016-06-29       Impact factor: 4.379

2.  Awakening sleeping beauty: production of propionic acid in Escherichia coli through the sbm operon requires the activity of a methylmalonyl-CoA epimerase.

Authors:  Ricardo Axayacatl Gonzalez-Garcia; Tim McCubbin; Annalena Wille; Manuel Plan; Lars Keld Nielsen; Esteban Marcellin
Journal:  Microb Cell Fact       Date:  2017-07-17       Impact factor: 5.328

3.  Biofilm microenvironment induces a widespread adaptive amino-acid fermentation pathway conferring strong fitness advantage in Escherichia coli.

Authors:  Sylvie Létoffé; Sabina Chalabaev; José Dugay; Franziska Stressmann; Bianca Audrain; Jean-Charles Portais; Fabien Letisse; Jean-Marc Ghigo
Journal:  PLoS Genet       Date:  2017-05-19       Impact factor: 5.917

4.  Multicopy Single-Stranded DNA Directs Intestinal Colonization of Enteric Pathogens.

Authors:  Johanna R Elfenbein; Leigh A Knodler; Ernesto S Nakayasu; Charles Ansong; Heather M Brewer; Lydia Bogomolnaya; L Garry Adams; Michael McClelland; Joshua N Adkins; Helene L Andrews-Polymenis
Journal:  PLoS Genet       Date:  2015-09-14       Impact factor: 5.917

5.  The role of ACT-like subdomain in bacterial threonine dehydratases.

Authors:  Xuefei Yu; Yanyan Li; Xiaoyuan Wang
Journal:  PLoS One       Date:  2014-01-24       Impact factor: 3.240

6.  Molecular evolution of threonine dehydratase in bacteria.

Authors:  Xuefei Yu; Ye Li; Xiaoyuan Wang
Journal:  PLoS One       Date:  2013-12-04       Impact factor: 3.240

7.  Mutation accumulation and horizontal gene transfer in Escherichia coli colonizing the gut of old mice.

Authors:  Hugo C Barreto; Nelson Frazão; Ana Sousa; Anke Konrad; Isabel Gordo
Journal:  Commun Integr Biol       Date:  2020-06-24
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.