Literature DB >> 8277940

In vivo analysis of chromatin following nystatin-mediated import of active enzymes into Saccharomyces cerevisiae.

S Venditti1, G Camilloni.   

Abstract

In vivo DNA-protein interactions are usually studied at the molecular level using DNA-degrading agents of low molecular weight. In order to be useful, macromolecular probes of chromatin structure, such as enzymes must first cross the cell membrane. In this paper we describe the introduction and evaluation of macromolecules with enzymatic activity into yeast spheroplasts treated with the polyene antibiotic nystatin. We report the low resolution analysis of chromatin structure in the promoter region of the Saccharomyces cerevisiae gene encoding DNA topoisomerase I by this technique using micrococcal nuclease and restriction enzymes.

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Year:  1994        PMID: 8277940     DOI: 10.1007/bf00277353

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  16 in total

Review 1.  Nuclease hypersensitive sites in chromatin.

Authors:  D S Gross; W T Garrard
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

2.  The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence.

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Journal:  Cell       Date:  1979-04       Impact factor: 41.582

3.  Potentiation of fusidic acid and lentinan effects upon normal and transformed fibroblastic cells by amphotericin B.

Authors:  M Kuwano; S Akiyama; H Endo; M Kohga
Journal:  Biochem Biophys Res Commun       Date:  1972-12-04       Impact factor: 3.575

4.  In vivo and in vitro effects of rifampicin and streptolydigin on transcription of Kluyveromyces lactis in the presence of nystatin.

Authors:  P Plevani; G Badaracco; N Marmiroli; G Cassani
Journal:  Nucleic Acids Res       Date:  1975-02       Impact factor: 16.971

5.  The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

Authors:  C Wu
Journal:  Nature       Date:  1980-08-28       Impact factor: 49.962

6.  Stimulation by amphotericin B of uridine transport, RNA synthesis and DNA synthesis in density-inhibited fibroblasts.

Authors:  T Kitagawa; T Andoh
Journal:  Exp Cell Res       Date:  1978-08       Impact factor: 3.905

7.  Cloning, characterization, and sequence of the yeast DNA topoisomerase I gene.

Authors:  C Thrash; A T Bankier; B G Barrell; R Sternglanz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

8.  Potentiation of rifampicin and 5-fluorocytosine as antifungal antibiotics by amphotericin B (yeast-membrane permeability-ribosomal RNA-eukaryotic cell-synergism).

Authors:  G Medoff; G S Kobayashi; C N Kwan; D Schlessinger; P Venkov
Journal:  Proc Natl Acad Sci U S A       Date:  1972-01       Impact factor: 11.205

9.  Comparative study of the condensation of chicken erythrocyte and calf thymus chromatins by di- and multivalent cations.

Authors:  R Marquet; P Colson; A M Matton; C Houssier; M Thiry; G Goessens
Journal:  J Biomol Struct Dyn       Date:  1988-02

10.  Nuclease hypersensitive regions with adjacent positioned nucleosomes mark the gene boundaries of the PHO5/PHO3 locus in yeast.

Authors:  A Almer; W Hörz
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

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  17 in total

1.  Hyperacetylation of chromatin at the ADH2 promoter allows Adr1 to bind in repressed conditions.

Authors:  Loredana Verdone; Jiansheng Wu; Kristen van Riper; Nataly Kacherovsky; Maria Vogelauer; Elton T Young; Michael Grunstein; Ernesto Di Mauro; Micaela Caserta
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

2.  Post-TATA binding protein recruitment clearance of Gcn5-dependent histone acetylation within promoter nucleosomes.

Authors:  Irini Topalidou; Manolis Papamichos-Chronakis; George Thireos
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

3.  Snf1/AMPK regulates Gcn5 occupancy, H3 acetylation and chromatin remodelling at S. cerevisiae ADY2 promoter.

Authors:  Georgia Abate; Emanuela Bastonini; Katherine A Braun; Loredana Verdone; Elton T Young; Micaela Caserta
Journal:  Biochim Biophys Acta       Date:  2012-01-28

4.  Gcn5p plays an important role in centromere kinetochore function in budding yeast.

Authors:  Stefano Vernarecci; Prisca Ornaghi; Anacristina Bâgu; Enrico Cundari; Paola Ballario; Patrizia Filetici
Journal:  Mol Cell Biol       Date:  2007-11-26       Impact factor: 4.272

5.  Chromatin structure of the Saccharomyces cerevisiae DNA topoisomerase I promoter in different growth phases.

Authors:  L Rubbi; G Camilloni; M Caserta; E Di Mauro; S Venditti
Journal:  Biochem J       Date:  1997-12-01       Impact factor: 3.857

6.  A rapid method for chromatin structure analysis in the filamentous fungus Aspergillus nidulans.

Authors:  R Gonzalez; C Scazzocchio
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

7.  Different roles for abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A gene.

Authors:  R F Lascaris; E Groot; P B Hoen; W H Mager; R J Planta
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

8.  Blunt-ended DNA double-strand breaks induced by endonucleases PvuII and EcoRV are poor substrates for repair in Saccharomyces cerevisiae.

Authors:  James W Westmoreland; Jennifer A Summers; Cory L Holland; Michael A Resnick; L Kevin Lewis
Journal:  DNA Repair (Amst)       Date:  2010-03-30

9.  Chromatin remodeling during Saccharomyces cerevisiae ADH2 gene activation.

Authors:  L Verdone; G Camilloni; E Di Mauro; M Caserta
Journal:  Mol Cell Biol       Date:  1996-05       Impact factor: 4.272

10.  Nhp6 facilitates Aft1 binding and Ssn6 recruitment, both essential for FRE2 transcriptional activation.

Authors:  George S Fragiadakis; Dimitris Tzamarias; Despina Alexandraki
Journal:  EMBO J       Date:  2004-01-22       Impact factor: 11.598

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