Literature DB >> 14739928

Nhp6 facilitates Aft1 binding and Ssn6 recruitment, both essential for FRE2 transcriptional activation.

George S Fragiadakis1, Dimitris Tzamarias, Despina Alexandraki.   

Abstract

We found Nhp6a/b yeast HMG-box chromatin-associated architectural factors and Ssn6 (Cyc8) corepressor to be crucial transcriptional coactivators of FRE2 gene. FRE2 encoding a plasma membrane ferric reductase is induced by the iron-responsive, DNA-binding, transcriptional activator Aft1. We have shown that Nhp6 interacts directly with the Aft1 N-half, including the DNA-binding region, to facilitate Aft1 binding at FRE2 UAS. Ssn6 also interacts directly with the Aft1 N-half and is recruited on FRE2 promoter only in the presence of both Aft1 and Nhp6. This Nhp6/Ssn6 role in Aft1-mediated transcription is FRE2 promoter context specific, and both regulators are required for activation-dependent chromatin remodeling. Our results provide the first in vivo biochemical evidence for nonsequence-specific HMG-box protein-facilitated recruitment of a yeast gene-specific transactivator to its DNA target site and for Nhp6-mediated Ssn6 promoter recruitment. Ssn6 has an explicitly coactivating role on FRE2 promoter only upon induction. Therefore, transcriptional activation in response to iron availability involves multiple protein interactions between the Aft1 iron-responsive DNA-binding factor and global regulators such as Nhp6 and Ssn6.

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Year:  2004        PMID: 14739928      PMCID: PMC1271752          DOI: 10.1038/sj.emboj.7600043

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  45 in total

Review 1.  In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment.

Authors:  M H Kuo; C D Allis
Journal:  Methods       Date:  1999-11       Impact factor: 3.608

2.  High-mobility-group proteins NHP6A and NHP6B participate in activation of the RNA polymerase III SNR6 gene.

Authors:  S Lopez; M Livingstone-Zatchej; S Jourdain; F Thoma; A Sentenac; M C Marsolier
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

Review 3.  Regulation of DNA-dependent activities by the functional motifs of the high-mobility-group chromosomal proteins.

Authors:  M Bustin
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

Review 4.  HMG1 and 2, and related 'architectural' DNA-binding proteins.

Authors:  J O Thomas; A A Travers
Journal:  Trends Biochem Sci       Date:  2001-03       Impact factor: 13.807

5.  Nhp6, an HMG1 protein, functions in SNR6 transcription by RNA polymerase III in S. cerevisiae.

Authors:  M Kruppa; R D Moir; D Kolodrubetz; I M Willis
Journal:  Mol Cell       Date:  2001-02       Impact factor: 17.970

6.  A new screen for protein interactions reveals that the Saccharomyces cerevisiae high mobility group proteins Nhp6A/B are involved in the regulation of the GAL1 promoter.

Authors:  H Laser; C Bongards; J Schüller; S Heck; N Johnsson; N Lehming
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

7.  Siderophore uptake and use by the yeast Saccharomyces cerevisiae.

Authors:  Emmanuel Lesuisse; Pierre-Louis Blaiseau; Andrew Dancis; Jean-Michel Camadro
Journal:  Microbiology (Reading)       Date:  2001-02       Impact factor: 2.777

Review 8.  Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes.

Authors:  R L Smith; A D Johnson
Journal:  Trends Biochem Sci       Date:  2000-07       Impact factor: 13.807

9.  Mutations in the yeast Nhp6 protein can differentially affect its in vivo functions.

Authors:  M Kruppa; D Kolodrubetz
Journal:  Biochem Biophys Res Commun       Date:  2001-02-09       Impact factor: 3.575

10.  Chromatin-mediated transcriptional regulation by the yeast architectural factors NHP6A and NHP6B.

Authors:  J M Moreira; S Holmberg
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

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  20 in total

1.  The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.

Authors:  Koon Ho Wong; Kevin Struhl
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

2.  Opposing roles for Set2 and yFACT in regulating TBP binding at promoters.

Authors:  Debabrata Biswas; Rinku Dutta-Biswas; Doyel Mitra; Yoichiro Shibata; Brian D Strahl; Tim Formosa; David J Stillman
Journal:  EMBO J       Date:  2006-09-14       Impact factor: 11.598

3.  Recruitment of Tup1p and Cti6p regulates heme-deficient expression of Aft1p target genes.

Authors:  Robert J Crisp; Erika M Adkins; Emily Kimmel; Jerry Kaplan
Journal:  EMBO J       Date:  2006-01-26       Impact factor: 11.598

Review 4.  Response to iron deprivation in Saccharomyces cerevisiae.

Authors:  Caroline C Philpott; Olga Protchenko
Journal:  Eukaryot Cell       Date:  2007-11-09

5.  Genetic interactions between Nhp6 and Gcn5 with Mot1 and the Ccr4-Not complex that regulate binding of TATA-binding protein in Saccharomyces cerevisiae.

Authors:  Debabrata Biswas; Yaxin Yu; Doyel Mitra; David J Stillman
Journal:  Genetics       Date:  2005-11-04       Impact factor: 4.562

6.  Pleiotropic corepressors Sin3 and Ssn6 interact with repressor Opi1 and negatively regulate transcription of genes required for phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.

Authors:  Yvonne Jäschke; Juliane Schwarz; Diana Clausnitzer; Carina Müller; Hans-Joachim Schüller
Journal:  Mol Genet Genomics       Date:  2010-11-23       Impact factor: 3.291

7.  Role for Nhp6, Gcn5, and the Swi/Snf complex in stimulating formation of the TATA-binding protein-TFIIA-DNA complex.

Authors:  Debabrata Biswas; Anthony N Imbalzano; Peter Eriksson; Yaxin Yu; David J Stillman
Journal:  Mol Cell Biol       Date:  2004-09       Impact factor: 4.272

8.  TATA-binding protein mutants that are lethal in the absence of the Nhp6 high-mobility-group protein.

Authors:  Peter Eriksson; Debabrata Biswas; Yaxin Yu; James M Stewart; David J Stillman
Journal:  Mol Cell Biol       Date:  2004-07       Impact factor: 4.272

9.  Synergy of Hir1, Ssn6, and Snf2 global regulators is the functional determinant of a Mac1 transcriptional switch in S. cerevisiae copper homeostasis.

Authors:  Alexandra Voutsina; George S Fragiadakis; Kalliopi Gkouskou; Despina Alexandraki
Journal:  Curr Genet       Date:  2019-01-28       Impact factor: 3.886

10.  Chd1 and yFACT act in opposition in regulating transcription.

Authors:  Debabrata Biswas; Rinku Dutta-Biswas; David J Stillman
Journal:  Mol Cell Biol       Date:  2007-07-09       Impact factor: 4.272

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