Literature DB >> 8171019

Polyamines regulate the expression of ornithine decarboxylase antizyme in vitro by inducing ribosomal frame-shifting.

E Rom1, C Kahana.   

Abstract

We provide here an example of a mammalian cellular gene expressed by frame-shifting. Conventional reading of the sequence of ornithine decarboxylase-antizyme mRNA (a protein that modulates the rate of ornithine decarboxylase degradation) results in premature termination at an in-frame termination codon (stop-1), located shortly after the initiation codon. By translating, in vitro in reticulocyte lysate, antizyme mRNA with a full coding capacity and various mutants derived from it, we demonstrate that antizyme expression requires that ribosomes shift from the first open reading frame (termed ORF0) to a second +1 open reading frame (ORF1). Our studies show that this frame-shifting, which occurs at maximal efficiency of approximately 20%, is stimulated by polyamines and requires the functional integrity of the stop codon (stop-1) of ORF0. By introducing in-frame deletions, we have shown that an 87-nt segment surrounding stop-1 enhances frame-shifting efficiency, whereas the 6 nt located just upstream to stop-1 are absolutely essential for this process. Because this segment does not contain sequences that were previously characterized as shifty segments, our results suggest that another mechanism of frame-shifting is involved in mediating antizyme expression.

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Year:  1994        PMID: 8171019      PMCID: PMC43702          DOI: 10.1073/pnas.91.9.3959

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  Degradation of ornithine decarboxylase in reticulocyte lysate is ATP-dependent but ubiquitin-independent.

Authors:  Z Bercovich; Y Rosenberg-Hasson; A Ciechanover; C Kahana
Journal:  J Biol Chem       Date:  1989-09-25       Impact factor: 5.157

2.  Recoding: reprogrammed genetic decoding.

Authors:  R F Gesteland; R B Weiss; J F Atkins
Journal:  Science       Date:  1992-09-18       Impact factor: 47.728

3.  Translational frameshifting: where will it stop?

Authors:  W J Craigen; C T Caskey
Journal:  Cell       Date:  1987-07-03       Impact factor: 41.582

4.  Expression of peptide chain release factor 2 requires high-efficiency frameshift.

Authors:  W J Craigen; C T Caskey
Journal:  Nature       Date:  1986 Jul 17-23       Impact factor: 49.962

5.  A persistent untranslated sequence within bacteriophage T4 DNA topoisomerase gene 60.

Authors:  W M Huang; S Z Ao; S Casjens; R Orlandi; R Zeikus; R Weiss; D Winge; M Fang
Journal:  Science       Date:  1988-02-26       Impact factor: 47.728

6.  Regulated degradation of ornithine decarboxylase requires interaction with the polyamine-inducible protein antizyme.

Authors:  X Li; P Coffino
Journal:  Mol Cell Biol       Date:  1992-08       Impact factor: 4.272

7.  Translational regulation of ornithine decarboxylase by polyamines.

Authors:  L Persson; I Holm; O Heby
Journal:  FEBS Lett       Date:  1986-09-15       Impact factor: 4.124

Review 8.  Retroviruses.

Authors:  H Varmus
Journal:  Science       Date:  1988-06-10       Impact factor: 47.728

9.  Frameshifting in the expression of the Escherichia coli trpR gene.

Authors:  I Benhar; C Miller; H Engelberg-Kulka
Journal:  Mol Microbiol       Date:  1992-10       Impact factor: 3.501

10.  Feedback control of ornithine decarboxylase expression by polyamines. Analysis of ornithine decarboxylase mRNA distribution in polysome profiles and of translation of this mRNA in vitro.

Authors:  I Holm; L Persson; L Stjernborg; L Thorsson; O Heby
Journal:  Biochem J       Date:  1989-03-01       Impact factor: 3.857

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  69 in total

1.  Antizyme frameshifting as a functional probe of eukaryotic translational termination.

Authors:  Zemfira N Karamysheva; Andrey L Karamyshev; Koichi Ito; Takashi Yokogawa; Kazuya Nishikawa; Yoshikazu Nakamura; Senya Matsufuji
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

2.  Stimulation of -1 programmed ribosomal frameshifting by a metabolite-responsive RNA pseudoknot.

Authors:  Ming-Yuan Chou; Szu-Chieh Lin; Kung-Yao Chang
Journal:  RNA       Date:  2010-04-30       Impact factor: 4.942

3.  Antizyme affects cell proliferation and viability solely through regulating cellular polyamines.

Authors:  Zippi Bercovich; Zohar Snapir; Alona Keren-Paz; Chaim Kahana
Journal:  J Biol Chem       Date:  2011-08-10       Impact factor: 5.157

4.  Knockdown of ornithine decarboxylase antizyme 1 causes loss of uptake regulation leading to increased N1, N11-bis(ethyl)norspermine (BENSpm) accumulation and toxicity in NCI H157 lung cancer cells.

Authors:  Alison V Fraser; Andrew C Goodwin; Amy Hacker-Prietz; Elizabeth Sugar; Patrick M Woster; Robert A Casero
Journal:  Amino Acids       Date:  2011-08-04       Impact factor: 3.520

Review 5.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

6.  Cloning of a trypanosomatid gene coding for an ornithine decarboxylase that is metabolically unstable even though it lacks the C-terminal degradation domain.

Authors:  F Svensson; C Ceriani; E L Wallström; I Kockum; I D Algranati; O Heby; L Persson
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-21       Impact factor: 11.205

7.  Polyamine-regulated unproductive splicing and translation of spermidine/spermine N1-acetyltransferase.

Authors:  Mervi T Hyvönen; Anne Uimari; Tuomo A Keinänen; Sami Heikkinen; Riikka Pellinen; Tiina Wahlfors; Arja Korhonen; Ale Närvänen; Jarmo Wahlfors; Leena Alhonen; Juhani Jänne
Journal:  RNA       Date:  2006-06-29       Impact factor: 4.942

8.  SPE1 and SPE2: two essential genes in the biosynthesis of polyamines that modulate +1 ribosomal frameshifting in Saccharomyces cerevisiae.

Authors:  D Balasundaram; J D Dinman; C W Tabor; H Tabor
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

Review 9.  The antizyme family for regulating polyamines.

Authors:  Chaim Kahana
Journal:  J Biol Chem       Date:  2018-10-24       Impact factor: 5.157

10.  Translational accuracy during exponential, postdiauxic, and stationary growth phases in Saccharomyces cerevisiae.

Authors:  Guillaume Stahl; Samia N Ben Salem; Lifeng Chen; Bing Zhao; Philip J Farabaugh
Journal:  Eukaryot Cell       Date:  2004-04
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