Literature DB >> 8168481

Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain.

T R Hebbes1, A L Clayton, A W Thorne, C Crane-Robinson.   

Abstract

The distribution of core histone acetylation across the chicken beta-globin locus has been mapped in 15 day chicken embryo erythrocytes by immunoprecipitation of mononucleosomes with an antibody recognizing acetylated histones, followed by hybridization probing at several points in the locus. A continuum of acetylation was observed, covering both genes and intergenic regions. Using the same probes, the generalized sensitivity to DNase I was mapped by monitoring the disappearance of intact genomic restriction fragments from Southern transfers. Close correspondence between the 33 kb of sensitive chromatin and the extent of acetylation indicates that one role of the modification could be the generation and/or maintenance of the open conformation. The precision of acetylation mapping makes it a possible approach to the definition of chromosomal domain boundaries.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 8168481      PMCID: PMC395022          DOI: 10.1002/j.1460-2075.1994.tb06451.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  33 in total

1.  ACETYLATION AND METHYLATION OF HISTONES AND THEIR POSSIBLE ROLE IN THE REGULATION OF RNA SYNTHESIS.

Authors:  V G ALLFREY; R FAULKNER; A E MIRSKY
Journal:  Proc Natl Acad Sci U S A       Date:  1964-05       Impact factor: 11.205

2.  Chromosomal subunits in active genes have an altered conformation.

Authors:  H Weintraub; M Groudine
Journal:  Science       Date:  1976-09-03       Impact factor: 47.728

3.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

4.  The DNase I sensitive domain of the chicken lysozyme gene spans 24 kb.

Authors:  K Jantzen; H P Fritton; T Igo-Kemenes
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

5.  Chromatin structure of the chicken lysozyme gene domain as determined by chromatin fractionation and micrococcal nuclease digestion.

Authors:  W H Strätling; A Dölle; A E Sippel
Journal:  Biochemistry       Date:  1986-01-28       Impact factor: 3.162

6.  Definition of 5' and 3' structural boundaries of the chromatin domain containing the ovalbumin multigene family.

Authors:  G M Lawson; B J Knoll; C J March; S L Woo; M J Tsai; B W O'Malley
Journal:  J Biol Chem       Date:  1982-02-10       Impact factor: 5.157

7.  The chicken beta globin gene region. Delineation of transcription units and developmental regulation of interspersed DNA repeats.

Authors:  B Villeponteau; G M Landes; M J Pankratz; H G Martinson
Journal:  J Biol Chem       Date:  1982-09-25       Impact factor: 5.157

8.  Chromatin structure of the chicken beta-globin gene region. Sensitivity to DNase I, micrococcal nuclease, and DNase II.

Authors:  W I Wood; G Felsenfeld
Journal:  J Biol Chem       Date:  1982-07-10       Impact factor: 5.157

9.  Two-dimensional gel analysis of histones in acid extracts of nuclei, cells, and tissues.

Authors:  W M Bonner; M H West; J D Stedman
Journal:  Eur J Biochem       Date:  1980-08

10.  Participation of core histone "tails" in the stabilization of the chromatin solenoid.

Authors:  J Allan; N Harborne; D C Rau; H Gould
Journal:  J Cell Biol       Date:  1982-05       Impact factor: 10.539

View more
  185 in total

Review 1.  Chromatin modification by DNA tracking.

Authors:  A Travers
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Acetylation of a specific promoter nucleosome accompanies activation of the epsilon-globin gene by beta-globin locus control region HS2.

Authors:  C Y Gui; A Dean
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

3.  Chromatin structure analysis of the mouse Xist locus.

Authors:  V McCabe; E J Formstone; L P O'Neill; B M Turner; N Brockdorff
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-22       Impact factor: 11.205

4.  Enhancer-dependent transcriptional oscillations in mouse erythroleukemia cells.

Authors:  Y Q Feng; R Alami; E E Bouhassira
Journal:  Mol Cell Biol       Date:  1999-07       Impact factor: 4.272

5.  Core histone N-termini play an essential role in mitotic chromosome condensation.

Authors:  A E de la Barre; V Gerson; S Gout; M Creaven; C D Allis; S Dimitrov
Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

6.  Transcriptional repression by the insulator protein CTCF involves histone deacetylases.

Authors:  M Lutz; L J Burke; G Barreto; F Goeman; H Greb; R Arnold; H Schultheiss; A Brehm; T Kouzarides; V Lobanenkov; R Renkawitz
Journal:  Nucleic Acids Res       Date:  2000-04-15       Impact factor: 16.971

7.  A human genomic library enriched in transcriptionally active sequences (aDNA library).

Authors:  A L Pelling; A W Thorne; C Crane-Robinson
Journal:  Genome Res       Date:  2000-06       Impact factor: 9.043

8.  Distribution of acetylated histones resulting from Gal4-VP16 recruitment of SAGA and NuA4 complexes.

Authors:  M Vignali; D J Steger; K E Neely; J L Workman
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

9.  Structural and functional conservation at the boundaries of the chicken beta-globin domain.

Authors:  N Saitoh; A C Bell; F Recillas-Targa; A G West; M Simpson; M Pikaart; G Felsenfeld
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

10.  Nuclear localization and histone acetylation: a pathway for chromatin opening and transcriptional activation of the human beta-globin locus.

Authors:  D Schübeler; C Francastel; D M Cimbora; A Reik; D I Martin; M Groudine
Journal:  Genes Dev       Date:  2000-04-15       Impact factor: 11.361

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.