Literature DB >> 10783166

Nuclear localization and histone acetylation: a pathway for chromatin opening and transcriptional activation of the human beta-globin locus.

D Schübeler1, C Francastel, D M Cimbora, A Reik, D I Martin, M Groudine.   

Abstract

We have investigated the mechanism, structural correlates, and cis-acting elements involved in chromatin opening and gene activation, using the human beta-globin locus as a model. Full transcriptional activity of the human beta-globin locus requires the locus control region (LCR), composed of a series of nuclease hypersensitive sites located upstream of this globin gene cluster. Our previous analysis of naturally occurring and targeted LCR deletions revealed that chromatin opening and transcriptional activity in the endogenous beta-globin locus are dissociable and dependent on distinct cis-acting elements. We now report that general histone H3/H4 acetylation and relocation of the locus away from centromeric heterochromatin in the interphase nucleus are correlated and do not require the LCR. In contrast, LCR-dependent promoter activation is associated with localized histone H3 hyperacetylation at the LCR and the transcribed beta-globin-promoter and gene. On the basis of these results, we suggest a multistep model for gene activation; localization away from centromeric heterochromatin is required to achieve general hyperacetylation and an open chromatin structure of the locus, whereas a mechanism involving LCR/promoter histone H3 hyperacetylation is required for high-level transcription of the beta-globin genes.

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Year:  2000        PMID: 10783166      PMCID: PMC316536     

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  47 in total

1.  Evidence for silencing compartments within the yeast nucleus: a role for telomere proximity and Sir protein concentration in silencer-mediated repression.

Authors:  L Maillet; C Boscheron; M Gotta; S Marcand; E Gilson; S M Gasser
Journal:  Genes Dev       Date:  1996-07-15       Impact factor: 11.361

Review 2.  Chromatin unfolds.

Authors:  G Felsenfeld
Journal:  Cell       Date:  1996-07-12       Impact factor: 41.582

3.  The transcriptional integrator CREB-binding protein mediates positive cross talk between nuclear hormone receptors and the hematopoietic bZip protein p45/NF-E2.

Authors:  X Cheng; M J Reginato; N C Andrews; M A Lazar
Journal:  Mol Cell Biol       Date:  1997-03       Impact factor: 4.272

4.  Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin.

Authors:  K E Brown; S S Guest; S T Smale; K Hahm; M Merkenschlager; A G Fisher
Journal:  Cell       Date:  1997-12-12       Impact factor: 41.582

Review 5.  Nuclear organization and transcriptional silencing in yeast.

Authors:  M Gotta; S M Gasser
Journal:  Experientia       Date:  1996-12-15

6.  X-Inactivation and histone H4 acetylation in embryonic stem cells.

Authors:  A M Keohane; L P O'neill; N D Belyaev; J S Lavender; B M Turner
Journal:  Dev Biol       Date:  1996-12-15       Impact factor: 3.582

7.  Analysis of chromatin structure by in vivo formaldehyde cross-linking.

Authors:  V Orlando; H Strutt; R Paro
Journal:  Methods       Date:  1997-02       Impact factor: 3.608

8.  Distinctive patterns of histone H4 acetylation are associated with defined sequence elements within both heterochromatic and euchromatic regions of the human genome.

Authors:  C A Johnson; L P O'Neill; A Mitchell; B M Turner
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

9.  CREB-binding protein cooperates with transcription factor GATA-1 and is required for erythroid differentiation.

Authors:  G A Blobel; T Nakajima; R Eckner; M Montminy; S H Orkin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

10.  Efficient transcriptional silencing in Saccharomyces cerevisiae requires a heterochromatin histone acetylation pattern.

Authors:  M Braunstein; R E Sobel; C D Allis; B M Turner; J R Broach
Journal:  Mol Cell Biol       Date:  1996-08       Impact factor: 4.272

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  122 in total

1.  Acetylation of a specific promoter nucleosome accompanies activation of the epsilon-globin gene by beta-globin locus control region HS2.

Authors:  C Y Gui; A Dean
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain.

Authors:  E C Forsberg; K M Downs; H M Christensen; H Im; P A Nuzzi; E H Bresnick
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

Review 3.  Modifications of the histone N-terminal domains. Evidence for an "epigenetic code"?

Authors:  A Imhof; P B Becker
Journal:  Mol Biotechnol       Date:  2001-01       Impact factor: 2.695

Review 4.  Nuclear position leaves its mark on replication timing.

Authors:  D M Gilbert
Journal:  J Cell Biol       Date:  2001-01-22       Impact factor: 10.539

5.  Patterns of histone acetylation suggest dual pathways for gene activation by a bifunctional locus control region.

Authors:  F Elefant; Y Su; S A Liebhaber; N E Cooke
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

6.  Genomic targeting of methylated DNA: influence of methylation on transcription, replication, chromatin structure, and histone acetylation.

Authors:  D Schübeler; M C Lorincz; D M Cimbora; A Telling; Y Q Feng; E E Bouhassira; M Groudine
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

7.  Long-distance control of origin choice and replication timing in the human beta-globin locus are independent of the locus control region.

Authors:  D M Cimbora; D Schübeler; A Reik; J Hamilton; C Francastel; E M Epner; M Groudine
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

8.  Methylation-mediated proviral silencing is associated with MeCP2 recruitment and localized histone H3 deacetylation.

Authors:  M C Lorincz; D Schübeler; M Groudine
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

9.  Differential gene silencing by trans-heterochromatin in Drosophila melanogaster.

Authors:  Amy K Csink; Alexander Bounoutas; Michelle L Griffith; Joy F Sabl; Brian T Sage
Journal:  Genetics       Date:  2002-01       Impact factor: 4.562

Review 10.  Histone acetylation: a switch between repressive and permissive chromatin. Second in review series on chromatin dynamics.

Authors:  Anton Eberharter; Peter B Becker
Journal:  EMBO Rep       Date:  2002-03       Impact factor: 8.807

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