Literature DB >> 8136026

Assignment of all four disulfide bridges in echistatin.

M Bauer1, Y Sun, C Degenhardt, B Kozikowski.   

Abstract

Echistatin is a 49-amino-acid protein from Echis carinatus venom. It contains four disulfide bonds. Since the disulfide bonding is critical for biological activity; it is very important to assign the disulfide linkage in this protein. Echistatin was incubated in 250 mM oxalic acid at 100 degrees C for 4 hr under nitrogen. Under these conditions, many overlapping disulfide-containing peptides were identified by ionspray mass spectrometry. Ionspray MS/MS data indicate that the four disulfide bonds are Cys 2-Cys 11, Cys 7-Cys 32, Cys 8-Cys 37, and Cys 20-Cys 39. To our knowledge, this is the first time all four disulfide bonds in echistatin have been assigned in one experiment without disulfide bond exchange. This approach, which combines oxalic acid hydrolysis and ionspray MS/MS, may be very useful for assigning disulfide bridges in other proteins from the disintegrin family.

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Year:  1993        PMID: 8136026     DOI: 10.1007/bf01024934

Source DB:  PubMed          Journal:  J Protein Chem        ISSN: 0277-8033


  15 in total

1.  The solution structure of echistatin: evidence for disulphide bond rearrangement in homologous snake toxins.

Authors:  R M Cooke; B G Carter; P Murray-Rust; M J Hartshorn; P Herzyk; R E Hubbard
Journal:  Protein Eng       Date:  1992-09

2.  An investigation of fragmentation mechanisms of doubly protonated tryptic peptides.

Authors:  X J Tang; R K Boyd
Journal:  Rapid Commun Mass Spectrom       Date:  1992-11       Impact factor: 2.419

Review 3.  Disintegrins: a family of integrin inhibitory proteins from viper venoms.

Authors:  R J Gould; M A Polokoff; P A Friedman; T F Huang; J C Holt; J J Cook; S Niewiarowski
Journal:  Proc Soc Exp Biol Med       Date:  1990-11

4.  Three-dimensional structure of echistatin, the smallest active RGD protein.

Authors:  V Saudek; R A Atkinson; J T Pelton
Journal:  Biochemistry       Date:  1991-07-30       Impact factor: 3.162

5.  Assignment of disulfide bonds in proteins by fast atom bombardment mass spectrometry.

Authors:  R Yazdanparast; P C Andrews; D L Smith; J E Dixon
Journal:  J Biol Chem       Date:  1987-02-25       Impact factor: 5.157

6.  Chemical synthesis of echistatin, a potent inhibitor of platelet aggregation from Echis carinatus: synthesis and biological activity of selected analogs.

Authors:  V M Garsky; P K Lumma; R M Freidinger; S M Pitzenberger; W C Randall; D F Veber; R J Gould; P A Friedman
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

7.  The secondary structure of echistatin from 1H-NMR, circular-dichroism and Raman spectroscopy.

Authors:  V Saudek; R A Atkinson; P Lepage; J T Pelton
Journal:  Eur J Biochem       Date:  1991-12-05

8.  1H NMR studies of echistatin in solution. Sequential resonance assignments and secondary structure.

Authors:  C Dalvit; H Widmer; G Bovermann; R Breckenridge; R Metternich
Journal:  Eur J Biochem       Date:  1991-12-05

9.  Nuclear magnetic resonance studies of the snake toxin echistatin. 1H resonance assignments and secondary structure.

Authors:  R M Cooke; B G Carter; D M Martin; P Murray-Rust; M P Weir
Journal:  Eur J Biochem       Date:  1991-12-05

10.  The disulfide bridge pattern of snake venom disintegrins, flavoridin and echistatin.

Authors:  J J Calvete; Y Wang; K Mann; W Schäfer; S Niewiarowski; G J Stewart
Journal:  FEBS Lett       Date:  1992-09-14       Impact factor: 4.124

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  11 in total

1.  The disulfide bond pattern of catrocollastatin C, a disintegrin-like/cysteine-rich protein isolated from Crotalus atrox venom.

Authors:  J J Calvete; M P Moreno-Murciano; L Sanz; M Jürgens; M Schrader; M Raida; D C Benjamin; J W Fox
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

2.  Disulphide-bond pattern and molecular modelling of the dimeric disintegrin EMF-10, a potent and selective integrin alpha5beta1 antagonist from Eristocophis macmahoni venom.

Authors:  J J Calvete; M Jürgens; C Marcinkiewicz; A Romero; M Schrader; S Niewiarowski
Journal:  Biochem J       Date:  2000-02-01       Impact factor: 3.857

3.  Ion Mobility-Mass Spectrometry as a Tool for the Structural Characterization of Peptides Bearing Intramolecular Disulfide Bond(s).

Authors:  Philippe Massonnet; Jean R N Haler; Gregory Upert; Michel Degueldre; Denis Morsa; Nicolas Smargiasso; Gilles Mourier; Nicolas Gilles; Loïc Quinton; Edwin De Pauw
Journal:  J Am Soc Mass Spectrom       Date:  2016-08-03       Impact factor: 3.109

4.  Determination of the disulfide bond arrangement of human respiratory syncytial virus attachment (G) protein by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  J J Gorman; B L Ferguson; D Speelman; J Mills
Journal:  Protein Sci       Date:  1997-06       Impact factor: 6.725

5.  Comprehensive identification of protein disulfide bonds with pepsin/trypsin digestion, Orbitrap HCD and Spectrum Identification Machine.

Authors:  Chuanlong Cui; Tong Liu; Tong Chen; Johanna Lu; Ian Casaren; Diogo Borges Lima; Paulo Costa Carvalho; Annie Beuve; Hong Li
Journal:  J Proteomics       Date:  2018-12-14       Impact factor: 4.044

6.  Disulfide Connectivity Analysis of Peptides Bearing Two Intramolecular Disulfide Bonds Using MALDI In-Source Decay.

Authors:  Philippe Massonnet; Jean R N Haler; Gregory Upert; Nicolas Smargiasso; Gilles Mourier; Nicolas Gilles; Loïc Quinton; Edwin De Pauw
Journal:  J Am Soc Mass Spectrom       Date:  2018-07-09       Impact factor: 3.109

7.  Snake venom disintegrins: novel dimeric disintegrins and structural diversification by disulphide bond engineering.

Authors:  Juan J Calvete; M Paz Moreno-Murciano; R David G Theakston; Dariusz G Kisiel; Cezary Marcinkiewicz
Journal:  Biochem J       Date:  2003-06-15       Impact factor: 3.857

8.  Conformation and concerted dynamics of the integrin-binding site and the C-terminal region of echistatin revealed by homonuclear NMR.

Authors:  Daniel Monleón; Vicent Esteve; Helena Kovacs; Juan J Calvete; Bernardo Celda
Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

9.  Amino acid sequence and homology modeling of obtustatin, a novel non-RGD-containing short disintegrin isolated from the venom of Vipera lebetina obtusa.

Authors:  M Paz Moreno-Murciano; Daniel Monleón; Juan J Calvete; Bernardo Celda; Cezary Marcinkiewicz
Journal:  Protein Sci       Date:  2003-02       Impact factor: 6.725

10.  A biomimetic strategy in the synthesis and fragmentation of cyclic protein.

Authors:  J P Tam; Y A Lu
Journal:  Protein Sci       Date:  1998-07       Impact factor: 6.725

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