Literature DB >> 1438157

The solution structure of echistatin: evidence for disulphide bond rearrangement in homologous snake toxins.

R M Cooke1, B G Carter, P Murray-Rust, M J Hartshorn, P Herzyk, R E Hubbard.   

Abstract

The solution structure of the fibrinogen antagonist, echistatin, has been determined by a combination of NMR and simulated annealing methods. While the structure of the disulphide-linked core is well-defined by the NMR data, the N- and C-termini and the loop bearing the RGD sequence (which is responsible for the fibrinogen antagonist properties) are poorly defined. The pattern of disulphide bridges, which could not be determined by classical methods, was predicted by a statistical analysis of the simulated annealing structures. This pattern is distinct from that for the homologous protein kistrin, leading to the novel suggestion that homologous proteins possess non-conserved patterns of disulphide bridges.

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Year:  1992        PMID: 1438157     DOI: 10.1093/protein/5.6.473

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  10 in total

1.  Simultaneous determination of disulphide bridge topology and three-dimensional structure using ambiguous intersulphur distance restraints: possibilities and limitations.

Authors:  J Boisbouvier; M Blackledge; A Sollier; D Marion
Journal:  J Biomol NMR       Date:  2000-03       Impact factor: 2.835

2.  Evaluation of the role of proline residues flanking the RGD motif of dendroaspin, an inhibitior of platelet aggregation and cell adhesion.

Authors:  X Lu; Y Sun; D Shang; B Wattam; S Egglezou; T Hughes; E Hyde; M Scully; V Kakkar
Journal:  Biochem J       Date:  2001-05-01       Impact factor: 3.857

3.  The integrin alpha IIb beta 3 contains distinct and interacting binding sites for snake-venom RGD (Arg-Gly-Asp) proteins. Evidence that the receptor-binding characteristics of snake-venom RGD proteins are related to the amino acid environment flanking the sequence RGD.

Authors:  S Rahman; X Lu; V V Kakkar; K S Authi
Journal:  Biochem J       Date:  1995-11-15       Impact factor: 3.857

4.  Conformation and concerted dynamics of the integrin-binding site and the C-terminal region of echistatin revealed by homonuclear NMR.

Authors:  Daniel Monleón; Vicent Esteve; Helena Kovacs; Juan J Calvete; Bernardo Celda
Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

5.  Three-dimensional structure of echistatin and dynamics of the active site.

Authors:  Y Chen; A K Suri; D Kominos; G Sanyal; A M Naylor; S M Pitzenberger; V M Garsky; R M Levy; J Baum
Journal:  J Biomol NMR       Date:  1994-05       Impact factor: 2.835

6.  Determination of the structure of two novel echistatin variants and comparison of the ability of echistatin variants to inhibit aggregation of platelets from different species.

Authors:  Y L Chen; T F Huang; S W Chen; I H Tsai
Journal:  Biochem J       Date:  1995-01-15       Impact factor: 3.857

7.  Assignment of all four disulfide bridges in echistatin.

Authors:  M Bauer; Y Sun; C Degenhardt; B Kozikowski
Journal:  J Protein Chem       Date:  1993-12

8.  Preferential antagonism of the interactions of the integrin alpha IIb beta 3 with immobilized glycoprotein ligands by snake-venom RGD (Arg-Gly-Asp) proteins. Evidence supporting a functional role for the amino acid residues flanking the tripeptide RGD in determining the inhibitory properties of snake-venom RGD proteins.

Authors:  X Lu; J A Williams; J J Deadman; G P Salmon; V V Kakkar; J M Wilkinson; D Baruch; K S Authi; S Rahman
Journal:  Biochem J       Date:  1994-12-15       Impact factor: 3.857

Review 9.  ADAM-15 disintegrin-like domain structure and function.

Authors:  Dong Lu; Mike Scully; Vijay Kakkar; Xinjie Lu
Journal:  Toxins (Basel)       Date:  2010-10-19       Impact factor: 4.546

Review 10.  Structure-Function Relationship of the Disintegrin Family: Sequence Signature and Integrin Interaction.

Authors:  Ariana A Vasconcelos; Jorge C Estrada; Victor David; Luciana S Wermelinger; Fabio C L Almeida; Russolina B Zingali
Journal:  Front Mol Biosci       Date:  2021-12-03
  10 in total

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