Literature DB >> 8112304

Mutations in eukaryotic 18S ribosomal RNA affect translational fidelity and resistance to aminoglycoside antibiotics.

Y O Chernoff1, A Vincent, S W Liebman.   

Abstract

Mutations have been created in the Saccharomyces cerevisiae 18S rRNA gene that correspond to those known to be involved in the control of translational fidelity or antibiotic resistance in prokaryotes. Yeast strains, in which essentially all chromosomal rDNA repeats are deleted and all cellular rRNAs are encoded by plasmid, have been constructed that contain only mutant 18S rRNA. In Escherichia coli, a C-->U substitution at position 912 of the small subunit rRNA causes streptomycin resistance. Eukaryotes normally carry U at the corresponding position and are naturally resistant to streptomycin. We show that a U-->C transition (rdn-4) at this position of the yeast 18S rRNA gene decreases resistance to streptomycin. The rdn-4 mutation also increases resistance to paromomycin and G-418, and inhibits nonsense suppression induced by paromomycin. The same phenotypes, as well as a slow growth phenotype, are also associated with rdn-2, whose prokaryotic counterpart, 517 G-->A, manifests itself as a suppressor rather than an antisuppressor. Neither rdn-2- nor rdn-4-related phenotypes could be detected in the presence of the normal level of wild-type rDNA repeats. Our data demonstrate that eukaryotic rRNA is involved in the control of translational fidelity, and indicate that rRNA features important for interactions with aminoglycosides have been conserved throughout evolution.

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Year:  1994        PMID: 8112304      PMCID: PMC394890          DOI: 10.1002/j.1460-2075.1994.tb06334.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  45 in total

1.  A ribosomal ambiguity mutation in the 530 loop of E. coli 16S rRNA.

Authors:  M O'Connor; H U Göringer; A E Dahlberg
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

2.  Unusual resistance of peptidyl transferase to protein extraction procedures.

Authors:  H F Noller; V Hoffarth; L Zimniak
Journal:  Science       Date:  1992-06-05       Impact factor: 47.728

3.  The interaction between streptomycin and ribosomal RNA.

Authors:  D Leclerc; P Melançon; L Brakier-Gingras
Journal:  Biochimie       Date:  1991-12       Impact factor: 4.079

Review 4.  tRNA-rRNA interactions and peptidyl transferase.

Authors:  H F Noller
Journal:  FASEB J       Date:  1993-01       Impact factor: 5.191

Review 5.  Vector systems for the expression, analysis and cloning of DNA sequences in S. cerevisiae.

Authors:  S A Parent; C M Fenimore; K A Bostian
Journal:  Yeast       Date:  1985-12       Impact factor: 3.239

6.  A chemiluminescent assay for quantitation of beta-galactosidase in the femtogram range: application to quantitation of beta-galactosidase in lacZ-transfected cells.

Authors:  V K Jain; I T Magrath
Journal:  Anal Biochem       Date:  1991-11-15       Impact factor: 3.365

7.  The yeast nuclear gene MRF1 encodes a mitochondrial peptide chain release factor and cures several mitochondrial RNA splicing defects.

Authors:  H J Pel; C Maat; M Rep; L A Grivell
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

8.  The yeast omnipotent suppressor SUP46 encodes a ribosomal protein which is a functional and structural homolog of the Escherichia coli S4 ram protein.

Authors:  A Vincent; S W Liebman
Journal:  Genetics       Date:  1992-10       Impact factor: 4.562

9.  Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site-directed cross-linking study with mRNA analogues.

Authors:  O Dontsova; S Dokudovskaya; A Kopylov; A Bogdanov; J Rinke-Appel; N Jünke; R Brimacombe
Journal:  EMBO J       Date:  1992-08       Impact factor: 11.598

10.  A system to study transcription by yeast RNA polymerase I within the chromosomal context: functional analysis of the ribosomal DNA enhancer and the RBP1/REB1 binding sites.

Authors:  T Kulkens; C A van der Sande; A F Dekker; H van Heerikhuizen; R J Planta
Journal:  EMBO J       Date:  1992-12       Impact factor: 11.598

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  63 in total

1.  Translational suppressors and antisuppressors alter the efficiency of the Ty1 programmed translational frameshift.

Authors:  C L Burck; Y O Chernoff; R Liu; P J Farabaugh; S W Liebman
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

Review 2.  Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae.

Authors:  D Kressler; P Linder; J de La Cruz
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

3.  Structural basis for selectivity and toxicity of ribosomal antibiotics.

Authors:  E C Böttger; B Springer; T Prammananan; Y Kidan; P Sander
Journal:  EMBO Rep       Date:  2001-04       Impact factor: 8.807

4.  Assembly and functional organization of the nucleolus: ultrastructural analysis of Saccharomyces cerevisiae mutants.

Authors:  S Trumtel; I Léger-Silvestre; P E Gleizes; F Teulières; N Gas
Journal:  Mol Biol Cell       Date:  2000-06       Impact factor: 4.138

5.  Integrase mediates nuclear localization of Ty3.

Authors:  S S Lin; M H Nymark-McMahon; L Yieh; S B Sandmeyer
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

6.  Terminating eukaryote translation: domain 1 of release factor eRF1 functions in stop codon recognition.

Authors:  G Bertram; H A Bell; D W Ritchie; G Fullerton; I Stansfield
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

Review 7.  Engineering of bacterial ribosomes: replacement of all seven Escherichia coli rRNA operons by a single plasmid-encoded operon.

Authors:  M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-02       Impact factor: 11.205

8.  Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.

Authors:  Malik Chaker-Margot; Mirjam Hunziker; Jonas Barandun; Brian D Dill; Sebastian Klinge
Journal:  Nat Struct Mol Biol       Date:  2015-10-19       Impact factor: 15.369

9.  The ubiquitin-conjugating enzyme Rad6 (Ubc2) is required for silencing in Saccharomyces cerevisiae.

Authors:  H Huang; A Kahana; D E Gottschling; L Prakash; S W Liebman
Journal:  Mol Cell Biol       Date:  1997-11       Impact factor: 4.272

Review 10.  Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2014-11-01       Impact factor: 3.931

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