Literature DB >> 7990132

Stability against denaturation mechanisms in halophilic malate dehydrogenase "adapt" to solvent conditions.

F Bonneté1, D Madern, G Zaccaï.   

Abstract

Malate dehydrogenase from Haloarcula marisomortui (hMDH) is active, soluble and mildly unstable in an unusually wide range of salt conditions and temperatures, making it a particularly interesting model for the study of solvent effects on protein stability. Its denaturation (loss of activity due to concomitant dissociation and unfolding) kinetics was studied as a function of temperature and concentration of NaCl, potassium phosphate or ammonium sulphate in H2O or 2H2O. A transition-state-theory analysis was applied to the data. In all cases, stability (resistance to denaturation) increased with increasing salt concentration, and when 2H2O replaced H2O. Each salt condition was associated with a particular energy regime that dominated stability. In NaCl/H2O, a positive enthalpy term, delta H not equal to 0, always dominated the activation free energy of denaturation, delta G not equal to 0. In potassium phosphate/H2O and ammonium sulphate/H2O, on the other hand, stability was dominated by a negative activation entropy, delta S not equal to 0. and delta H not equal to 0 changed sign between 10 degrees C and 20 degrees C, consistent with a strong hydrophobic effect contribution, in these salting-out solvents. Decreasing stability at low temperatures, favouring cold denaturation, was observed. Replacing H2O by 2H2O strengthened the hydrophobic effect in all conditions. As a consequence, conditions were found in which hMDH was not halophilic; below 10 degrees C, it was stable in approximately 0.1 M NaCl/2H2O. The solution structure and preferential solvent interactions of hMDH in H2O or 2H2O solvents containing NaCl were studied by densimetry and neutron scattering. Despite the different stability of the protein in H2O or 2H2O, an experimentally identical invariant solution particle was formed in both solvents. It had a total volume of 1.165 cm3 g-1 and bound about 0.4 g of H2O (0.44 g of 2H2O) and about 0.08 g NaCl g protein. The impact of these results on a stabilisation model for hMDH, involving ion binding, is discussed.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 7990132     DOI: 10.1006/jmbi.1994.1741

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  26 in total

1.  Fast dynamics of halophilic malate dehydrogenase and BSA measured by neutron scattering under various solvent conditions influencing protein stability.

Authors:  M Tehei; D Madern; C Pfister; G Zaccai
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-04       Impact factor: 11.205

2.  Effect of heavy water on protein flexibility.

Authors:  Patrizia Cioni; Giovanni B Strambini
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

3.  Adaptation to extreme environments: macromolecular dynamics in bacteria compared in vivo by neutron scattering.

Authors:  Moeava Tehei; Bruno Franzetti; Dominique Madern; Margaret Ginzburg; Ben Z Ginzburg; Marie-Thérèse Giudici-Orticoni; Mireille Bruschi; Giuseppe Zaccai
Journal:  EMBO Rep       Date:  2004-01       Impact factor: 8.807

Review 4.  The effect of water on protein dynamics.

Authors:  G Zaccai
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

5.  Dynamics-stability relationships in apo- and holomyoglobin: a combined neutron scattering and molecular dynamics simulations study.

Authors:  Andreas Maximilian Stadler; Eric Pellegrini; Mark Johnson; Jörg Fitter; Giuseppe Zaccai
Journal:  Biophys J       Date:  2012-01-18       Impact factor: 4.033

6.  SANS investigation of the photosynthetic machinery of Chloroflexus aurantiacus.

Authors:  Kuo-Hsiang Tang; Volker S Urban; Jianzhong Wen; Yueyong Xin; Robert E Blankenship
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

7.  Shape and oligomerization state of the cytoplasmic domain of the phototaxis transducer II from Natronobacterium pharaonis.

Authors:  Ivan L Budyak; Vitaliy Pipich; Olga S Mironova; Ramona Schlesinger; Giuseppe Zaccai; Judith Klein-Seetharaman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-10       Impact factor: 11.205

Review 8.  Large crystal growth by thermal control allows combined X-ray and neutron crystallographic studies to elucidate the protonation states in Aspergillus flavus urate oxidase.

Authors:  E Oksanen; M P Blakeley; F Bonneté; M T Dauvergne; F Dauvergne; M Budayova-Spano
Journal:  J R Soc Interface       Date:  2009-07-08       Impact factor: 4.118

9.  Solvent isotope effect on macromolecular dynamics in E. coli.

Authors:  Marion Jasnin; Moeava Tehei; Martine Moulin; Michael Haertlein; Giuseppe Zaccai
Journal:  Eur Biophys J       Date:  2008-02-20       Impact factor: 1.733

10.  Flexibility of the cytoplasmic domain of the phototaxis transducer II from Natronomonas pharaonis.

Authors:  Ivan L Budyak; Olga S Mironova; Naveena Yanamala; Vijayalaxmi Manoharan; Georg Büldt; Ramona Schlesinger; Judith Klein-Seetharaman
Journal:  J Biophys       Date:  2008-10-16
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.