Literature DB >> 7988566

Disruption of RNA editing in Leishmania tarentolae by the loss of minicircle-encoded guide RNA genes.

O H Thiemann1, D A Maslov, L Simpson.   

Abstract

RNA editing in kinetoplastids appears to be a labile genetic trait that is affected by prolonged cell culture. The transcripts of the G1-G5 cryptogenes are pan-edited in the recently isolated LEM125 strain of Leishmania tarentolae, but not in the UC strain which has been in culture for 55 years. At least 32 minicircle-encoded guide RNAs (gRNAs) for the editing of G1-G5 transcripts are present in LEM125 and absent in UC. We hypothesize that specific minicircle sequence classes encoding gRNAs for the editing of these transcripts were lost during the long culture history of the UC strain. The protein products, which include components of complex I of the respiratory chain, are probably not required during the culture stage of the Leishmania life cycle.

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Year:  1994        PMID: 7988566      PMCID: PMC395534          DOI: 10.1002/j.1460-2075.1994.tb06907.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  37 in total

1.  Maxicircle CR1 transcripts of Trypanosoma brucei are edited and developmentally regulated and encode a putative iron-sulfur protein homologous to an NADH dehydrogenase subunit.

Authors:  A E Souza; P J Myler; K Stuart
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

2.  Generation of unexpected editing patterns in Leishmania tarentolae mitochondrial mRNAs: misediting produced by misguiding.

Authors:  N R Sturm; D A Maslov; B Blum; L Simpson
Journal:  Cell       Date:  1992-08-07       Impact factor: 41.582

3.  The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editing.

Authors:  D A Maslov; L Simpson
Journal:  Cell       Date:  1992-08-07       Impact factor: 41.582

Review 4.  The evolution of RNA editing in kinetoplastid protozoa.

Authors:  L F Landweber
Journal:  Biosystems       Date:  1992       Impact factor: 1.973

5.  Transkinetoplastidy--a novel phenomenon involving bulk alterations of mitochondrion-kinetoplast DNA of a trypanosomatid protozoan.

Authors:  S Y Lee; S T Lee; K P Chang
Journal:  J Protozool       Date:  1992 Jan-Feb

6.  Recurrent polymorphisms in small chromosomes of Leishmania tarentolae after nutrient stress or subcloning.

Authors:  L Rovai; C Tripp; K Stuart; L Simpson
Journal:  Mol Biochem Parasitol       Date:  1992-01       Impact factor: 1.759

7.  RNA editing involves indiscriminate U changes throughout precisely defined editing domains.

Authors:  C J Decker; B Sollner-Webb
Journal:  Cell       Date:  1990-06-15       Impact factor: 41.582

8.  Leishmania tarentolae minicircles of different sequence classes encode single guide RNAs located in the variable region approximately 150 bp from the conserved region.

Authors:  N R Sturm; L Simpson
Journal:  Nucleic Acids Res       Date:  1991-11-25       Impact factor: 16.971

9.  Succinate-dependent metabolism in Trypanosoma cruzi epimastigotes.

Authors:  A Denicola-Seoane; H Rubbo; E Prodanov; J F Turrens
Journal:  Mol Biochem Parasitol       Date:  1992-08       Impact factor: 1.759

10.  Extensive editing of both processed and preprocessed maxicircle CR6 transcripts in Trypanosoma brucei.

Authors:  L K Read; P J Myler; K Stuart
Journal:  J Biol Chem       Date:  1992-01-15       Impact factor: 5.157

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  29 in total

1.  A theoretical study of random segregation of minicircles in trypanosomatids.

Authors:  N J Savill; P G Higgs
Journal:  Proc Biol Sci       Date:  1999-03-22       Impact factor: 5.349

2.  Guide RNAs of the recently isolated LEM125 strain of Leishmania tarentolae: an unexpected complexity.

Authors:  G Gao; S T Kapushoc; A M Simpson; O H Thiemann; L Simpson
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

Review 3.  High throughput sequencing revolution reveals conserved fundamentals of U-indel editing.

Authors:  Sara L Zimmer; Rachel M Simpson; Laurie K Read
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-06-11       Impact factor: 9.957

Review 4.  Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa?

Authors:  Pavel Flegontov; Michael W Gray; Gertraud Burger; Julius Lukeš
Journal:  Curr Genet       Date:  2011-05-05       Impact factor: 3.886

Review 5.  The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria.

Authors:  J D Alfonzo; O Thiemann; L Simpson
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

Review 6.  RNA editing in kinetoplastid protozoa.

Authors:  K Stuart; T E Allen; S Heidmann; S D Seiwert
Journal:  Microbiol Mol Biol Rev       Date:  1997-03       Impact factor: 11.056

7.  RNA editing in the free-living bodonid Bodo saltans.

Authors:  D Blom; A de Haan; M van den Berg; P Sloof; M Jirku; J Lukes; R Benne
Journal:  Nucleic Acids Res       Date:  1998-03-01       Impact factor: 16.971

Review 8.  The mitochondrial complex I of trypanosomatids--an overview of current knowledge.

Authors:  Margarida Duarte; Ana M Tomás
Journal:  J Bioenerg Biomembr       Date:  2014-06-25       Impact factor: 2.945

9.  Complete set of mitochondrial pan-edited mRNAs in Leishmania mexicana amazonensis LV78.

Authors:  Dmitri A Maslov
Journal:  Mol Biochem Parasitol       Date:  2010-06-01       Impact factor: 1.759

10.  Sequence and structural requirements for optimal guide RNA-directed insertional editing within Leishmania tarentolae.

Authors:  Raj D Pai; Lisa M Oppegard; Gregory J Connell
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

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