Literature DB >> 9106367

RNA editing in kinetoplastid protozoa.

K Stuart1, T E Allen, S Heidmann, S D Seiwert.   

Abstract

Mitochondrial transcripts in kinetoplastids undergo remarkable posttranscriptional editing by uridylate insertion and deletion. The often dramatic remodeling of pre-mRNA sequences is directed by small guide RNAs (gRNAs) to produce mature mRNAs. In vitro analyses of editing have been used to determine the mechanism of editing and show that editing occurs by a series of enzyme-catalyzed steps. They also show that chimeric gRNA/mRNA molecules are not editing intermediates as proposed but are aberrant end products of editing. The complexes and molecules that catalyze editing are now being identified and characterized. The origin of editing, its developmental regulation which helps control the switching between terminal respiratory systems during the life cycle of trypanosomes, and other areas for future study are discussed.

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Year:  1997        PMID: 9106367      PMCID: PMC232603          DOI: 10.1128/mmbr.61.1.105-120.1997

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  99 in total

1.  The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editing.

Authors:  D A Maslov; L Simpson
Journal:  Cell       Date:  1992-08-07       Impact factor: 41.582

2.  Formation of guide RNA/messenger RNA chimeric molecules in vitro, the initial step of RNA editing, is dependent on an anchor sequence.

Authors:  B Blum; L Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

3.  RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing.

Authors:  R Sabatini; S L Hajduk
Journal:  J Biol Chem       Date:  1995-03-31       Impact factor: 5.157

4.  Editing domains of Trypanosoma brucei mitochondrial RNAs identified by secondary structure.

Authors:  K J Piller; C J Decker; L N Rusché; M E Harris; S L Hajduk; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  1995-06       Impact factor: 4.272

5.  RNA editing: transfer of genetic information from gRNA to precursor mRNA in vitro.

Authors:  S D Seiwert; K Stuart
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

6.  Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties.

Authors:  R A Corell; L K Read; G R Riley; J K Nellissery; T E Allen; M L Kable; M D Wachal; S D Seiwert; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

7.  Minicircle-encoded guide RNAs from Crithidia fasciculata.

Authors:  S Yasuhira; L Simpson
Journal:  RNA       Date:  1995-08       Impact factor: 4.942

8.  Extensive editing of CR2 maxicircle transcripts of Trypanosoma brucei predicts a protein with homology to a subunit of NADH dehydrogenase.

Authors:  A E Souza; H H Shu; L K Read; P J Myler; K D Stuart
Journal:  Mol Cell Biol       Date:  1993-11       Impact factor: 4.272

9.  Trypanosoma brucei mitochondrial CR4 gene encodes an extensively edited mRNA with completely edited sequence only in bloodstream forms.

Authors:  R A Corell; P Myler; K Stuart
Journal:  Mol Biochem Parasitol       Date:  1994-03       Impact factor: 1.759

10.  Novel pattern of editing regions in mitochondrial transcripts of the cryptobiid Trypanoplasma borreli.

Authors:  J Lukes; G J Arts; J van den Burg; A de Haan; F Opperdoes; P Sloof; R Benne
Journal:  EMBO J       Date:  1994-11-01       Impact factor: 11.598

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  75 in total

1.  Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

Authors:  J Cruz-Reyes; A Zhelonkina; L Rusche; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex.

Authors:  A K Panigrahi; S P Gygi; N L Ernst; R P Igo; S S Palazzo; A Schnaufer; D S Weston; N Carmean; R Salavati; R Aebersold; K D Stuart
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

3.  Processing of polycistronic guide RNAs is associated with RNA editing complexes in Trypanosoma brucei.

Authors:  J Grams; M T McManus; S L Hajduk
Journal:  EMBO J       Date:  2000-10-16       Impact factor: 11.598

4.  Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing.

Authors:  R P Igo; S S Palazzo; M L Burgess; A K Panigrahi; K Stuart
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

5.  The trypanosome homolog of human p32 interacts with RBP16 and stimulates its gRNA binding activity.

Authors:  M L Hayman; M M Miller; D M Chandler; C C Goulah; L K Read
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

6.  Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

Authors:  C E Huang; J Cruz-Reyes; A G Zhelonkina; S O'Hearn; E Wirtz; B Sollner-Webb
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

7.  TbMP81 is required for RNA editing in Trypanosoma brucei.

Authors:  Maciej Drozdz; Setareh S Palazzo; Reza Salavati; Jeff O'Rear; Christine Clayton; Kenneth Stuart
Journal:  EMBO J       Date:  2002-04-02       Impact factor: 11.598

Review 8.  Unconventional rules of small nuclear RNA transcription and cap modification in trypanosomatids.

Authors:  Christian Tschudi; Elisabetta Ullut
Journal:  Gene Expr       Date:  2002

9.  RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei.

Authors:  Robert P Igo; Sobomabo D Lawson; Kenneth Stuart
Journal:  Mol Cell Biol       Date:  2002-03       Impact factor: 4.272

10.  Composition of the editing complex of Trypanosoma brucei.

Authors:  K Stuart; A K Panigrahi; A Schnaufer; M Drozdz; C Clayton; R Salavati
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-01-29       Impact factor: 6.237

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