Literature DB >> 10212451

A theoretical study of random segregation of minicircles in trypanosomatids.

N J Savill1, P G Higgs.   

Abstract

The kinetoplast (k) DNA network of trypanosomatids is made up of approximately 50 maxicircles and the order of 10(4) minicircles. It has been proposed, based on various observations and experiments, that the minicircles are randomly segregated between daughter cells when the parent cell divides. In this paper, this random segregation hypothesis is theoretically tested in a population dynamics model to see if it can account for the observed phenomena. The hypothesis is shown to successfully explain, in Leishmania tarentolae, the observation that there are a few major and many minor minicircle classes, the fluctuations of minicircle class copy numbers over time, the loss of non-essential minicircle classes, the long survival times of a few of these classes and that these classes are likely to be the major classes within the population. Implications of the model are examined for trypanosomatids in general, leading to several predictions. The model predicts variation in network size within a population, variation in the average network size and large-scale changes in class copy number over long time-scales, an evolutionary pressure towards larger network sizes, the selective advantage of non-random over random segregation, very strong selection for the amplified class in Crithidia fasciculata if its minicircles undergo random segregation and that Trypanosoma brucei may use sexual reproduction to maintain its viability.

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Year:  1999        PMID: 10212451      PMCID: PMC1689810          DOI: 10.1098/rspb.1999.0680

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  40 in total

1.  The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editing.

Authors:  D A Maslov; L Simpson
Journal:  Cell       Date:  1992-08-07       Impact factor: 41.582

2.  Kinetoplast DNA minicircles are inherited from both parents in genetic crosses of Trypanosoma brucei.

Authors:  W Gibson; M Crow; J Kearns
Journal:  Parasitol Res       Date:  1997       Impact factor: 2.289

3.  Minicircle-encoded guide RNAs from Crithidia fasciculata.

Authors:  S Yasuhira; L Simpson
Journal:  RNA       Date:  1995-08       Impact factor: 4.942

Review 4.  Sense from nonsense: RNA editing in mitochondria of kinetoplastid protozoa and slime molds.

Authors:  L Simpson; O H Thiemann
Journal:  Cell       Date:  1995-06-16       Impact factor: 41.582

Review 5.  The structure and replication of kinetoplast DNA.

Authors:  T A Shapiro; P T Englund
Journal:  Annu Rev Microbiol       Date:  1995       Impact factor: 15.500

6.  The identity of Leishmania tarentolae Wenyon 1921.

Authors:  K R Wallbanks; R Maazoun; E U Canning; J A Rioux
Journal:  Parasitology       Date:  1985-02       Impact factor: 3.234

7.  Hybrid formation between African trypanosomes during cyclical transmission.

Authors:  L Jenni; S Marti; J Schweizer; B Betschart; R W Le Page; J M Wells; A Tait; P Paindavoine; E Pays; M Steinert
Journal:  Nature       Date:  1986 Jul 10-16       Impact factor: 49.962

8.  Timing of nuclear and kinetoplast DNA replication and early morphological events in the cell cycle of Trypanosoma brucei.

Authors:  R Woodward; K Gull
Journal:  J Cell Sci       Date:  1990-01       Impact factor: 5.285

9.  Changes in network topology during the replication of kinetoplast DNA.

Authors:  J Chen; P T Englund; N R Cozzarelli
Journal:  EMBO J       Date:  1995-12-15       Impact factor: 11.598

10.  Kinetoplast DNA replication: mechanistic differences between Trypanosoma brucei and Crithidia fasciculata.

Authors:  M L Ferguson; A F Torri; D Pérez-Morga; D C Ward; P T Englund
Journal:  J Cell Biol       Date:  1994-08       Impact factor: 10.539

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  17 in total

1.  Guide RNAs of the recently isolated LEM125 strain of Leishmania tarentolae: an unexpected complexity.

Authors:  G Gao; S T Kapushoc; A M Simpson; O H Thiemann; L Simpson
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

Review 2.  Kinetoplast DNA network: evolution of an improbable structure.

Authors:  Julius Lukes; D Lys Guilbride; Jan Votýpka; Alena Zíková; Rob Benne; Paul T Englund
Journal:  Eukaryot Cell       Date:  2002-08

3.  Asymmetrical division of the kinetoplast DNA network of the trypanosome.

Authors:  Zefeng Wang; Mark E Drew; James C Morris; Paul T Englund
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

Review 4.  Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa?

Authors:  Pavel Flegontov; Michael W Gray; Gertraud Burger; Julius Lukeš
Journal:  Curr Genet       Date:  2011-05-05       Impact factor: 3.886

5.  The effects of density on the topological structure of the mitochondrial DNA from trypanosomes.

Authors:  Y Diao; K Hinson; R Kaplan; M Vazquez; J Arsuaga
Journal:  J Math Biol       Date:  2011-06-14       Impact factor: 2.259

Review 6.  Evolution of RNA editing in trypanosome mitochondria.

Authors:  L Simpson; O H Thiemann; N J Savill; J D Alfonzo; D A Maslov
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

7.  What happens when Trypanosoma brucei leaves Africa.

Authors:  Robert E Jensen; Larry Simpson; Paul T Englund
Journal:  Trends Parasitol       Date:  2008-08-18

8.  Assembly and annotation of the mitochondrial minicircle genome of a differentiation-competent strain of Trypanosoma brucei.

Authors:  Sinclair Cooper; Elizabeth S Wadsworth; Torsten Ochsenreiter; Alasdair Ivens; Nicholas J Savill; Achim Schnaufer
Journal:  Nucleic Acids Res       Date:  2019-12-02       Impact factor: 16.971

9.  Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing.

Authors:  Louisa A Messenger; Martin S Llewellyn; Tapan Bhattacharyya; Oscar Franzén; Michael D Lewis; Juan David Ramírez; Hernan J Carrasco; Björn Andersson; Michael A Miles
Journal:  PLoS Negl Trop Dis       Date:  2012-04-10

10.  Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region.

Authors:  Scott J Westenberger; Gustavo C Cerqueira; Najib M El-Sayed; Bianca Zingales; David A Campbell; Nancy R Sturm
Journal:  BMC Genomics       Date:  2006-03-22       Impact factor: 3.969

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