Literature DB >> 7970630

The phylogeny of tRNA molecules and the origin of the genetic code.

M Di Giulio1.   

Abstract

The evolutionary relationships between transfer RNA (tRNA) molecules are analyzed by parsimony algorithms. The position of the topologies expected on the basis of the hypotheses made to explain the origin of the genetic code, on the frequency distribution of all the possible tree topologies of the evolutionary relationships between tRNAs seems to lead to the following conclusion: The hypothesis (Wong, J. T., Proc. Natl. Acad. Sci. USA, 1975, 72: 1909-1912) that sees the genetic code as a map of the biosynthetic relationships between amino acids seems to occupy a statistically significant position on these frequency distributions, thus reflecting a significant part of the tRNA phylogeny.

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Year:  1994        PMID: 7970630     DOI: 10.1007/BF01582018

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  25 in total

1.  The evolution of aminoacyl-tRNA synthetases, the biosynthetic pathways of amino acids and the genetic code.

Authors:  M Di Giulio
Journal:  Orig Life Evol Biosph       Date:  1992       Impact factor: 1.950

2.  A statistical test of hypotheses on the organization and origin of the genetic code.

Authors:  E Szathmáry; E Zintzaras
Journal:  J Mol Evol       Date:  1992-09       Impact factor: 2.395

3.  On the relationships between the genetic code coevolution hypothesis and the physicochemical hypothesis.

Authors:  M Di Giulio
Journal:  Z Naturforsch C J Biosci       Date:  1991 Mar-Apr

4.  How old is the genetic code? Statistical geometry of tRNA provides an answer.

Authors:  M Eigen; B F Lindemann; M Tietze; R Winkler-Oswatitsch; A Dress; A von Haeseler
Journal:  Science       Date:  1989-05-12       Impact factor: 47.728

5.  The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code.

Authors:  W M Fitch; K Upper
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

6.  The genetic code and error transmission.

Authors:  C Alff-Steinberger
Journal:  Proc Natl Acad Sci U S A       Date:  1969-10       Impact factor: 11.205

7.  Genetic code correlations: amino acids and their anticodon nucleotides.

Authors:  A L Weber; J C Lacey
Journal:  J Mol Evol       Date:  1978-08-02       Impact factor: 2.395

8.  Role of the amino-acid "code" and of selection for conformation in the evolution of proteins.

Authors:  C J Epstein
Journal:  Nature       Date:  1966-04-02       Impact factor: 49.962

9.  Origin of glutaminyl-tRNA synthetase: an example of palimpsest?

Authors:  M Di Giulio
Journal:  J Mol Evol       Date:  1993-07       Impact factor: 2.395

10.  A multivariate study of the relationship between the genetic code and the physical-chemical properties of amino acids.

Authors:  M Sjöström; S Wold
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

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  7 in total

1.  Stable tRNA-based phylogenies using only 76 nucleotides.

Authors:  Jeremy Widmann; J Kirk Harris; Catherine Lozupone; Alexey Wolfson; Rob Knight
Journal:  RNA       Date:  2010-06-17       Impact factor: 4.942

2.  The beta-sheets of proteins, the biosynthetic relationships between amino acids, and the origin of the genetic code.

Authors:  M Di Giulio
Journal:  Orig Life Evol Biosph       Date:  1996-12       Impact factor: 1.950

3.  Evolution of initiator tRNAs and selection of methionine as the initiating amino acid.

Authors:  Souvik Bhattacharyya; Umesh Varshney
Journal:  RNA Biol       Date:  2016-06-20       Impact factor: 4.652

4.  The phylogeny of tRNAs seems to confirm the predictions of the coevolution theory of the origin of the genetic code.

Authors:  M Di Giulio
Journal:  Orig Life Evol Biosph       Date:  1995-12       Impact factor: 1.950

5.  The natural history of transfer RNA and its interactions with the ribosome.

Authors:  Gustavo Caetano-Anollés; Feng-Jie Sun
Journal:  Front Genet       Date:  2014-05-09       Impact factor: 4.599

6.  Stem-Loop RNA Hairpins in Giant Viruses: Invading rRNA-Like Repeats and a Template Free RNA.

Authors:  Hervé Seligmann; Didier Raoult
Journal:  Front Microbiol       Date:  2018-02-01       Impact factor: 5.640

7.  An extension of the coevolution theory of the origin of the genetic code.

Authors:  Massimo Di Giulio
Journal:  Biol Direct       Date:  2008-09-05       Impact factor: 4.540

  7 in total

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