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Literature DB >> 7937064

PROSITE: recent developments.

Abstract

PROSITE is a compilation of sites and patterns found in protein sequences; it can be used as a method of determining the function of uncharacterized proteins translated from genomic or cDNA sequences.

Mesh：

Substances：

Year: 1994 PMID： 7937064 PMCID： PMC308326

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

14 in total

1. Construction of a dictionary of sequence motifs that characterize groups of related proteins.

Authors: A Ogiwara; I Uchiyama; Y Seto; M Kanehisa
Journal: Protein Eng Date: 1992-09

2. ProSearch: fast searching of protein sequences with regular expression patterns related to protein structure and function.

Authors: L F Kolakowski; J A Leunissen; J E Smith
Journal: Biotechniques Date: 1992-12 Impact factor: 1.993

Review 3. The elucidation of protein function by sequence motif analysis.

Authors: T C Hodgman
Journal: Comput Appl Biosci Date: 1989-02

4. Finding sequence motifs in groups of functionally related proteins.

Authors: H O Smith; T M Annau; S Chandrasegaran
Journal: Proc Natl Acad Sci U S A Date: 1990-01 Impact factor: 11.205

5. Automated assembly of protein blocks for database searching.

Authors: S Henikoff; J G Henikoff
Journal: Nucleic Acids Res Date: 1991-12-11 Impact factor: 16.971

6. The EMBL Network File Server.

Authors: P J Stoehr; R A Omond
Journal: Nucleic Acids Res Date: 1989-08-25 Impact factor: 16.971

7. A sequence motif in many polymerases.

Authors: P Argos
Journal: Nucleic Acids Res Date: 1988-11-11 Impact factor: 16.971

8. Profile analysis: detection of distantly related proteins.

Authors: M Gribskov; A D McLachlan; D Eisenberg
Journal: Proc Natl Acad Sci U S A Date: 1987-07 Impact factor: 11.205

9. Identifying domains in protein sequences.

Authors: W C Barker; L T Hunt; D G George
Journal: Protein Seq Data Anal Date: 1988

10. A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server.

Authors: R D Appel; A Bairoch; D F Hochstrasser
Journal: Trends Biochem Sci Date: 1994-06 Impact factor: 13.807

51 in total

1. The PROSITE database, its status in 2002.

Authors: Laurent Falquet; Marco Pagni; Philipp Bucher; Nicolas Hulo; Christian J A Sigrist; Kay Hofmann; Amos Bairoch
Journal: Nucleic Acids Res Date: 2002-01-01 Impact factor: 16.971

2. Characterization of pURB500 from the archaeon Methanococcus maripaludis and construction of a shuttle vector.

Authors: D L Tumbula; T L Bowen; W B Whitman
Journal: J Bacteriol Date: 1997-05 Impact factor: 3.490

3. Identification of protein functions from a molecular surface database, eF-site.

Authors: Kengo Kinoshita; Jun'ichi Furui; Haruki Nakamura
Journal: J Struct Funct Genomics Date: 2002

4. Homology-modeled structure of the yeast mitochondrial citrate transport protein.

Authors: D Eric Walters; Ronald S Kaplan
Journal: Biophys J Date: 2004-08 Impact factor: 4.033

5. Cloning and biochemical characterization of the cyclophilin homologues from the free-living nematode Caenorhabditis elegans.

Authors: A P Page; K MacNiven; M O Hengartner
Journal: Biochem J Date: 1996-07-01 Impact factor: 3.857

6. An abundant cell-surface polypeptide is required for swimming by the nonflagellated marine cyanobacterium Synechococcus.

Authors: B Brahamsha
Journal: Proc Natl Acad Sci U S A Date: 1996-06-25 Impact factor: 11.205