Literature DB >> 7828590

In vitro RNA editing-like activity in a mitochondrial extract from Leishmania tarentolae.

G C Frech1, N Bakalara, L Simpson, A M Simpson.   

Abstract

A mitochondrial extract from Leishmania tarentolae directs the incorporation of uridylate (U) residues within the pre-edited domain of synthetic cytochrome b (CYb) and NADH dehydrogenase subunit 7 mRNA. This has several characteristics of an in vitro RNA editing activity, but no direct evidence for involvement of guide RNAs was obtained. Inhibition by micrococcal nuclease suggests a requirement for some type of endogenous RNA. The limitation of internal U-incorporation to the pre-edited region in the CYb mRNA and the inhibition by deletion or substitution of both mRNA anchor sequences for CYb gRNA-I and -II could be consistent either with a gRNA-mediated process or a secondary structure-mediated process. A low level of incorporation of [alpha-32P]CTP occurs at the same sites as UTP. Internal U-incorporation activity is selectively inhibited by heterologous RNAs, suggesting an involvement of low affinity RNA-binding proteins which can be competed by the added RNA.

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Year:  1995        PMID: 7828590      PMCID: PMC398065          DOI: 10.1002/j.1460-2075.1995.tb06988.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  30 in total

1.  Substrate masking: binding of RNA by EGTA-inactivated micrococcal nuclease results in artifactual inhibition of RNA processing reactions.

Authors:  M J Wang; P Gegenheimer
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

2.  A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information.

Authors:  B Blum; N Bakalara; L Simpson
Journal:  Cell       Date:  1990-01-26       Impact factor: 41.582

3.  Guide RNAs in kinetoplastid mitochondria have a nonencoded 3' oligo(U) tail involved in recognition of the preedited region.

Authors:  B Blum; L Simpson
Journal:  Cell       Date:  1990-07-27       Impact factor: 41.582

4.  RNA editing involves indiscriminate U changes throughout precisely defined editing domains.

Authors:  C J Decker; B Sollner-Webb
Journal:  Cell       Date:  1990-06-15       Impact factor: 41.582

5.  RNA editing by cytidine insertion in mitochondria of Physarum polycephalum.

Authors:  R Mahendran; M R Spottswood; D L Miller
Journal:  Nature       Date:  1991-01-31       Impact factor: 49.962

Review 6.  RNA editing: world's smallest introns?

Authors:  T R Cech
Journal:  Cell       Date:  1991-02-22       Impact factor: 41.582

7.  Creation of AUG initiation codons by addition of uridines within cytochrome b transcripts of kinetoplastids.

Authors:  J E Feagin; J M Shaw; L Simpson; K Stuart
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

8.  The Leishmania kinetoplast-mitochondrion contains terminal uridylyltransferase and RNA ligase activities.

Authors:  N Bakalara; A M Simpson; L Simpson
Journal:  J Biol Chem       Date:  1989-11-05       Impact factor: 5.157

9.  Site specific enzymatic cleavage of RNA.

Authors:  H Donis-Keller
Journal:  Nucleic Acids Res       Date:  1979-09-11       Impact factor: 16.971

10.  Characterization of two classes of ribonucleoprotein complexes possibly involved in RNA editing from Leishmania tarentolae mitochondria.

Authors:  M Peris; G C Frech; A M Simpson; F Bringaud; E Byrne; A Bakker; L Simpson
Journal:  EMBO J       Date:  1994-04-01       Impact factor: 11.598

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  9 in total

1.  Selective importation of RNA into isolated mitochondria from Leishmania tarentolae.

Authors:  M A Rubio; X Liu; H Yuzawa; J D Alfonzo; L Simpson
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

2.  Uridine insertion into preedited mRNA by a mitochondrial extract from Leishmania tarentolae: stereochemical evidence for the enzyme cascade model.

Authors:  G C Frech; L Simpson
Journal:  Mol Cell Biol       Date:  1996-08       Impact factor: 4.272

Review 3.  The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria.

Authors:  J D Alfonzo; O Thiemann; L Simpson
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

4.  Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria.

Authors:  L N Rusché; J Cruz-Reyes; K J Piller; B Sollner-Webb
Journal:  EMBO J       Date:  1997-07-01       Impact factor: 11.598

5.  Mitochondrial glutamate dehydrogenase from Leishmania tarentolae is a guide RNA-binding protein.

Authors:  F Bringaud; R Stripecke; G C Frech; S Freedland; C Turck; E M Byrne; L Simpson
Journal:  Mol Cell Biol       Date:  1997-07       Impact factor: 4.272

Review 6.  RNA editing in kinetoplastid protozoa.

Authors:  K Stuart; T E Allen; S Heidmann; S D Seiwert
Journal:  Microbiol Mol Biol Rev       Date:  1997-03       Impact factor: 11.056

7.  In vitro uridine insertion RNA editing mediated by cis-acting guide RNAs.

Authors:  S T Kapushoc; L Simpson
Journal:  RNA       Date:  1999-05       Impact factor: 4.942

8.  Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria.

Authors:  Feng Li; Peng Ge; Wong H Hui; Ivo Atanasov; Kestrel Rogers; Qiang Guo; Daren Osato; Arnold M Falick; Z Hong Zhou; Larry Simpson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-09       Impact factor: 11.205

9.  Distinct genetic landscape and a low response to doxorubicin in a luminal-A breast cancer cell line of Pakistani origin.

Authors:  Muhammad Shakeel; Salman Ahmed Khan; Anum Jabeen Mughal; Muhammad Irfan; Daniel C Hoessli; M Iqbal Choudhary; Muhammad Aurongzeb; Ishtiaq Ahmad Khan
Journal:  Mol Biol Rep       Date:  2021-09-08       Impact factor: 2.316

  9 in total

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