Literature DB >> 7710330

Characterization of the highly abundant polymorphic GC-rich-repetitive sequence (PGRS) present in Mycobacterium tuberculosis.

S Poulet1, S T Cole.   

Abstract

The polymorphic GC-rich repetitive sequence (PGRS) found on the chromosome of Mycobacterium tuberculosis was characterized by means of mapping, cloning and sequencing. PGRS was present in at least 26 loci and consisted of many tandem repeats of the consensus sequence CGGCGGCAA. As the core of the consensus motif was the triplet CGC, or CRR (where R is a purine), it seems likely that PGRS arose by means of triplet expansion, accounting for its polymorphism. Several copies of PGRS were linked to a conserved open reading frame. PGRS was used as the target sequence for the polymerase chain reaction in an attempt to develop a new typing technique.

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Year:  1995        PMID： 7710330     DOI： 10.1007/bf00381781

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN： 0302-8933            Impact factor:   2.552


  26 in total

1.  Molecular cloning of a highly repeated DNA element from Mycobacterium tuberculosis and its use as an epidemiological tool.

Authors:  B C Ross; K Raios; K Jackson; B Dwyer
Journal:  J Clin Microbiol       Date:  1992-04       Impact factor: 5.948

2.  IS6110, an IS-like element of Mycobacterium tuberculosis complex.

Authors:  D Thierry; M D Cave; K D Eisenach; J T Crawford; J H Bates; B Gicquel; J L Guesdon
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

3.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

4.  Comparison of various repetitive DNA elements as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis.

Authors:  D van Soolingen; P E de Haas; P W Hermans; P M Groenen; J D van Embden
Journal:  J Clin Microbiol       Date:  1993-08       Impact factor: 5.948

5.  Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method.

Authors:  P M Groenen; A E Bunschoten; D van Soolingen; J D van Embden
Journal:  Mol Microbiol       Date:  1993-12       Impact factor: 3.501

6.  Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family.

Authors:  R A McAdam; P W Hermans; D van Soolingen; Z F Zainuddin; D Catty; J D van Embden; J W Dale
Journal:  Mol Microbiol       Date:  1990-09       Impact factor: 3.501

7.  Use of an ordered cosmid library to deduce the genomic organization of Mycobacterium leprae.

Authors:  K Eiglmeier; N Honoré; S A Woods; B Caudron; S T Cole
Journal:  Mol Microbiol       Date:  1993-01       Impact factor: 3.501

8.  A rapid method for the detection of potentially viable Mycobacterium leprae in human biopsies: a novel application of PCR.

Authors:  S A Woods; S T Cole
Journal:  FEMS Microbiol Lett       Date:  1989-12       Impact factor: 2.742

9.  Insertion element IS986 from Mycobacterium tuberculosis: a useful tool for diagnosis and epidemiology of tuberculosis.

Authors:  P W Hermans; D van Soolingen; J W Dale; A R Schuitema; R A McAdam; D Catty; J D van Embden
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948

10.  Genetic and immunological analysis of Mycobacterium tuberculosis fibronectin-binding proteins.

Authors:  C Abou-Zeid; T Garbe; R Lathigra; H G Wiker; M Harboe; G A Rook; D B Young
Journal:  Infect Immun       Date:  1991-08       Impact factor: 3.441
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  35 in total

1.  The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.

Authors:  Lingling Li; John P Bannantine; Qing Zhang; Alongkorn Amonsin; Barbara J May; David Alt; Nilanjana Banerji; Sagarika Kanjilal; Vivek Kapur
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

2.  In vitro analysis of rates and spectra of mutations in a polymorphic region of the Rv0746 PE_PGRS gene of Mycobacterium tuberculosis.

Authors:  Edith E Machowski; Samantha Barichievy; Burkhard Springer; Steven I Durbach; Valerie Mizrahi
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

3.  Variation of the Mycobacterium tuberculosis PE_PGRS 33 gene among clinical isolates.

Authors:  Sarah Talarico; M Donald Cave; Carl F Marrs; Betsy Foxman; Lixin Zhang; Zhenhua Yang
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

4.  Evaluation of tuberculosis transmission in a community by 1 year of systematic typing of Mycobacterium tuberculosis clinical isolates.

Authors:  G Torrea; C Offredo; M Simonet; B Gicquel; P Berche; C Pierre-Audigier
Journal:  J Clin Microbiol       Date:  1996-05       Impact factor: 5.948

Review 5.  Interrelation of Ca2+ and PE_PGRS proteins during Mycobacterium tuberculosis pathogenesis.

Authors:  Laxman S Meena
Journal:  J Biosci       Date:  2019-03       Impact factor: 1.826

Review 6.  ESX secretion systems: mycobacterial evolution to counter host immunity.

Authors:  Matthias I Gröschel; Fadel Sayes; Roxane Simeone; Laleh Majlessi; Roland Brosch
Journal:  Nat Rev Microbiol       Date:  2016-09-26       Impact factor: 60.633

7.  Association of Mycobacterium tuberculosis PE PGRS33 polymorphism with clinical and epidemiological characteristics.

Authors:  Sarah Talarico; M Donald Cave; Betsy Foxman; Carl F Marrs; Lixin Zhang; Joseph H Bates; Zhenhua Yang
Journal:  Tuberculosis (Edinb)       Date:  2007-05-01       Impact factor: 3.131

8.  Snapshot of moving and expanding clones of Mycobacterium tuberculosis and their global distribution assessed by spoligotyping in an international study.

Authors:  Ingrid Filliol; Jeffrey R Driscoll; Dick van Soolingen; Barry N Kreiswirth; Kristin Kremer; Georges Valétudie; Duc Anh Dang; Rachael Barlow; Dilip Banerjee; Pablo J Bifani; Karine Brudey; Angel Cataldi; Robert C Cooksey; Debby V Cousins; Jeremy W Dale; Odir A Dellagostin; Francis Drobniewski; Guido Engelmann; Séverine Ferdinand; Deborah Gascoyne-Binzi; Max Gordon; M Cristina Gutierrez; Walter H Haas; Herre Heersma; Eric Kassa-Kelembho; Minh Ly Ho; Athanasios Makristathis; Caterina Mammina; Gerald Martin; Peter Moström; Igor Mokrousov; Valérie Narbonne; Olga Narvskaya; Antonino Nastasi; Sara Ngo Niobe-Eyangoh; Jean W Pape; Voahangy Rasolofo-Razanamparany; Malin Ridell; M Lucia Rossetti; Fritz Stauffer; Philip N Suffys; Howard Takiff; Jeanne Texier-Maugein; Véronique Vincent; Jacobus H de Waard; Christophe Sola; Nalin Rastogi
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

9.  GenHtr: a tool for comparative assessment of genetic heterogeneity in microbial genomes generated by massive short-read sequencing.

Authors:  Gongxin Yu
Journal:  BMC Bioinformatics       Date:  2010-10-12       Impact factor: 3.169

10.  The expression of genes coding for distinct types of glycine-rich proteins varies according to the biology of three metastriate ticks, Rhipicephalus (Boophilus) microplus, Rhipicephalus sanguineus and Amblyomma cajennense.

Authors:  Sandra R Maruyama; Elen Anatriello; Jennifer M Anderson; José M Ribeiro; Lucinda G Brandão; Jesus G Valenzuela; Beatriz R Ferreira; Gustavo R Garcia; Matias Pj Szabó; Sonal Patel; Richard Bishop; Isabel Kf de Miranda-Santos
Journal:  BMC Genomics       Date:  2010-06-08       Impact factor: 3.969
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