Literature DB >> 7666541

An internal ribosomal entry signal in the rat VL30 region of the Harvey murine sarcoma virus leader and its use in dicistronic retroviral vectors.

C Berlioz1, C Torrent, J L Darlix.   

Abstract

The genetic organization of the 5' genomic RNA domain of the highly oncogenic Harvey murine sarcoma virus appears to be unusual in that a multifunctional untranslated leader precedes the v-ras oncogene. This 5' leader is 1,076 nucleotides in length and is formed of independent regions involved in key steps of the viral life cycle: (i) the Moloney murine leukemia virus 5' repeat, untranslated 5' region, and primer binding site sequences necessary for the first steps of proviral DNA synthesis, (ii) the virus-like 30S (VL30)-derived sequence containing a functional dimerization-packaging signal (E/DLS) directing viral RNA dimerization and packaging into MLV virions, and (iii) an Alu-like sequence preceding the 5' untranslated sequence of v-rasH which contains the initiation codon of the p21ras oncoprotein. These functional features, the unusual length of this leader (1,076 nucleotides), and the presence of stable secondary structures between the cap and the v-ras initiation codon might well cause a premature stop of the scanning ribosomes and thus inhibit v-ras translation. In order to understand how Harvey murine sarcoma virus achieves a high level of expression of the ras oncogene, we asked whether the rat VL30 sequence, 5' to v-ras, could contribute to an efficient synthesis of the ras oncoprotein. The implications of the VL30 sequence in the translation initiation of Ha-ras were investigated in the rabbit reticulocyte lysate system and in murine cells. Results show that the rat VL30 sequence allows a cap-independent translation of a downstream reporter gene both in vitro and in murine cells. Additional experiments performed with dicistronic neo.VL30.lacZ mRNAs indicate that the 5' VL30 sequence (positions 380 to 794) contains an internal ribosomal entry signal. This finding led us to construct a new dicistronic retroviral vector with which the rat VL30 sequence was able to direct the efficient expression of a 3' cistron and packaging of recombinant dicistronic RNA into murine leukemia virus virions.

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Year:  1995        PMID: 7666541      PMCID: PMC189539     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  59 in total

1.  Evidence that the packaging signal of Moloney murine leukemia virus extends into the gag region.

Authors:  M A Bender; T D Palmer; R E Gelinas; A D Miller
Journal:  J Virol       Date:  1987-05       Impact factor: 5.103

2.  Promoter and enhancer activities of long terminal repeats associated with cellular retrovirus-like (VL30) elements.

Authors:  G Rotman; A Itin; E Keshet
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

3.  High-efficiency transformation of mammalian cells by plasmid DNA.

Authors:  C Chen; H Okayama
Journal:  Mol Cell Biol       Date:  1987-08       Impact factor: 4.272

4.  Effects of intercistronic length on the efficiency of reinitiation by eucaryotic ribosomes.

Authors:  M Kozak
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

5.  Structure-function relationship of Rous sarcoma virus leader RNA.

Authors:  J L Darlix; M Zuker; P F Spahr
Journal:  Nucleic Acids Res       Date:  1982-09-11       Impact factor: 16.971

6.  Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes.

Authors:  M Kozak
Journal:  Cell       Date:  1986-01-31       Impact factor: 41.582

7.  Anoxia-inducible rat VL30 elements and their relationship to ras-containing sarcoma viruses.

Authors:  B A Firulli; G R Anderson; D L Stoler; S D Estes
Journal:  J Virol       Date:  1993-11       Impact factor: 5.103

8.  Cap-independent translation of poliovirus mRNA is conferred by sequence elements within the 5' noncoding region.

Authors:  J Pelletier; G Kaplan; V R Racaniello; N Sonenberg
Journal:  Mol Cell Biol       Date:  1988-03       Impact factor: 4.272

9.  A safe packaging line for gene transfer: separating viral genes on two different plasmids.

Authors:  D Markowitz; S Goff; A Bank
Journal:  J Virol       Date:  1988-04       Impact factor: 5.103

10.  Influences of mRNA secondary structure on initiation by eukaryotic ribosomes.

Authors:  M Kozak
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

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  18 in total

Review 1.  Destiny of unspliced retroviral RNA: ribosome and/or virion?

Authors:  Melinda Butsch; Kathleen Boris-Lawrie
Journal:  J Virol       Date:  2002-04       Impact factor: 5.103

2.  Rous sarcoma virus translation revisited: characterization of an internal ribosome entry segment in the 5' leader of the genomic RNA.

Authors:  C Deffaud; J L Darlix
Journal:  J Virol       Date:  2000-12       Impact factor: 5.103

3.  Characterization of two distinct RNA domains that regulate translation of the Drosophila gypsy retroelement.

Authors:  Corinne Ronfort; Sylvain De Breyne; Virginie Sandrin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

Review 4.  Searching for IRES.

Authors:  Stephen D Baird; Marcel Turcotte; Robert G Korneluk; Martin Holcik
Journal:  RNA       Date:  2006-09-06       Impact factor: 4.942

Review 5.  RNA-protein interactions in regulation of picornavirus RNA translation.

Authors:  G J Belsham; N Sonenberg
Journal:  Microbiol Rev       Date:  1996-09

6.  The human immunodeficiency virus type 1 gag gene encodes an internal ribosome entry site.

Authors:  C B Buck; X Shen; M A Egan; T C Pierson; C M Walker; R F Siliciano
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

7.  Internal entry of ribosomes is directed by the 5' noncoding region of classical swine fever virus and is dependent on the presence of an RNA pseudoknot upstream of the initiation codon.

Authors:  R Rijnbrand; T van der Straaten; P A van Rijn; W J Spaan; P J Bredenbeek
Journal:  J Virol       Date:  1997-01       Impact factor: 5.103

8.  The leader of human immunodeficiency virus type 1 genomic RNA harbors an internal ribosome entry segment that is active during the G2/M phase of the cell cycle.

Authors:  Ann Brasey; Marcelo Lopez-Lastra; Theophile Ohlmann; Nancy Beerens; Ben Berkhout; Jean-Luc Darlix; Nahum Sonenberg
Journal:  J Virol       Date:  2003-04       Impact factor: 5.103

9.  Analysis of bovine foamy virus btas mRNA transcripts during persistent infection.

Authors:  Wei Wang; Juan Tan; Jian Wang; Qimin Chen; Yunqi Geng; Wentao Qiao
Journal:  Virus Genes       Date:  2009-11-13       Impact factor: 2.332

Review 10.  Mechanisms employed by retroviruses to exploit host factors for translational control of a complicated proteome.

Authors:  Cheryl Bolinger; Kathleen Boris-Lawrie
Journal:  Retrovirology       Date:  2009-01-24       Impact factor: 4.602

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