Literature DB >> 12634354

The leader of human immunodeficiency virus type 1 genomic RNA harbors an internal ribosome entry segment that is active during the G2/M phase of the cell cycle.

Ann Brasey1, Marcelo Lopez-Lastra, Theophile Ohlmann, Nancy Beerens, Ben Berkhout, Jean-Luc Darlix, Nahum Sonenberg.   

Abstract

The 5' leader of the human immunodeficiency virus type 1 (HIV-1) genomic RNA contains highly structured domains involved in key steps of the viral life cycle. These RNA domains inhibit cap-dependent protein synthesis. Here we report that the HIV-1 5' leader harbors an internal ribosome entry site (IRES) capable of driving protein synthesis during the G(2)/M cell cycle phase in which cap-dependent initiation is inhibited. The HIV-1 IRES was delineated with bicistronic mRNAs in in vitro and ex vivo assays. The HIV-1 leader IRES spans nucleotides 104 to 336 and partially overlaps the major determinants of genomic RNA packaging. These data strongly suggest that, as for HIV-1 transcription, IRES-mediated translation initiation could play an important role in virus replication during virus-induced G(2)/M cell cycle arrest.

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Year:  2003        PMID: 12634354      PMCID: PMC150645          DOI: 10.1128/jvi.77.7.3939-3949.2003

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  84 in total

1.  Translation of the human c-myc P0 tricistronic mRNA involves two independent internal ribosome entry sites.

Authors:  C Nanbru; A C Prats; L Droogmans; P Defrance; G Huez; V Kruys
Journal:  Oncogene       Date:  2001-07-12       Impact factor: 9.867

2.  Mutations in the TAR hairpin affect the equilibrium between alternative conformations of the HIV-1 leader RNA.

Authors:  H Huthoff; B Berkhout
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

Review 3.  Cell-cycle-dependent translational control.

Authors:  S Pyronnet; N Sonenberg
Journal:  Curr Opin Genet Dev       Date:  2001-02       Impact factor: 5.578

4.  In vitro cleavage of eIF4GI but not eIF4GII by HIV-1 protease and its effects on translation in the rabbit reticulocyte lysate system.

Authors:  Théophile Ohlmann; Déborah Prévôt; Didier Décimo; Florence Roux; Jérôme Garin; Simon J Morley; Jean-Luc Darlix
Journal:  J Mol Biol       Date:  2002-04-19       Impact factor: 5.469

5.  Multiple secondary structure rearrangements during HIV-1 RNA dimerization.

Authors:  Hendrik Huthoff; Ben Berkhout
Journal:  Biochemistry       Date:  2002-08-20       Impact factor: 3.162

6.  Insertion mutagenesis to increase secondary structure within the 5' noncoding region of a eukaryotic mRNA reduces translational efficiency.

Authors:  J Pelletier; N Sonenberg
Journal:  Cell       Date:  1985-03       Impact factor: 41.582

7.  RNA structure and packaging signals in the 5' leader region of the human immunodeficiency virus type 1 genome.

Authors:  Jared L Clever; Daniel Miranda; Tristram G Parslow
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

8.  Genetic variability of the AIDS virus: nucleotide sequence analysis of two isolates from African patients.

Authors:  M Alizon; S Wain-Hobson; L Montagnier; P Sonigo
Journal:  Cell       Date:  1986-07-04       Impact factor: 41.582

9.  Suppression of cap-dependent translation in mitosis.

Authors:  S Pyronnet; J Dostie; N Sonenberg
Journal:  Genes Dev       Date:  2001-08-15       Impact factor: 11.361

10.  A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon.

Authors:  Truus E M Abbink; Ben Berkhout
Journal:  J Biol Chem       Date:  2002-11-27       Impact factor: 5.157

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  103 in total

1.  Recent Insights into HIV Accessory Proteins.

Authors:  Jenny L. Anderson; Thomas J. Hope
Journal:  Curr Infect Dis Rep       Date:  2003-10       Impact factor: 3.725

2.  The 5' untranslated region and Gag product of Idefix, a long terminal repeat-retrotransposon from Drosophila melanogaster, act together to initiate a switch between translated and untranslated states of the genomic mRNA.

Authors:  Carine Meignin; Jean-Luc Bailly; Frédérick Arnaud; Bernard Dastugue; Chantal Vaury
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

3.  Characterization of two distinct RNA domains that regulate translation of the Drosophila gypsy retroelement.

Authors:  Corinne Ronfort; Sylvain De Breyne; Virginie Sandrin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

Review 4.  Properties and functions of the nucleocapsid protein in virus assembly.

Authors:  Delphine Muriaux; Jean-Luc Darlix
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

Review 5.  Translation initiation of the HIV-1 mRNA.

Authors:  Théophile Ohlmann; Chloé Mengardi; Marcelo López-Lastra
Journal:  Translation (Austin)       Date:  2014-10-31

6.  The 5' UTR of HIV-1 full-length mRNA and the Tat viral protein modulate the programmed -1 ribosomal frameshift that generates HIV-1 enzymes.

Authors:  Johanie Charbonneau; Karine Gendron; Gerardo Ferbeyre; Léa Brakier-Gingras
Journal:  RNA       Date:  2012-01-27       Impact factor: 4.942

7.  Encapsidation determinants located downstream of the major splice donor in the maedi-visna virus leader region.

Authors:  Helga Bjarnadottir; Bjarki Gudmundsson; Janus Gudnason; Jon J Jonsson
Journal:  J Virol       Date:  2006-09-13       Impact factor: 5.103

8.  Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated.

Authors:  Sergey E Dmitriev; Dmitri E Andreev; Ilya M Terenin; Ivan A Olovnikov; Vladimir S Prassolov; William C Merrick; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

9.  Translation initiation factors are not required for Dicistroviridae IRES function in vivo.

Authors:  Nilsa Deniz; Erik M Lenarcic; Dori M Landry; Sunnie R Thompson
Journal:  RNA       Date:  2009-03-19       Impact factor: 4.942

10.  Regulation of the cell-cycle-dependent internal ribosome entry site of the PITSLRE protein kinase: roles of Unr (upstream of N-ras) protein and phosphorylated translation initiation factor eIF-2alpha.

Authors:  Sandrine A Tinton; Bert Schepens; Yanik Bruynooghe; Rudi Beyaert; Sigrid Cornelis
Journal:  Biochem J       Date:  2005-01-01       Impact factor: 3.857

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