Literature DB >> 7664125

A common protein fold and similar active site in two distinct families of beta-glycanases.

R Dominguez1, H Souchon, S Spinelli, Z Dauter, K S Wilson, S Chauvaux, P Béguin, P M Alzari.   

Abstract

The structure of Clostridium thermocellum endoglucanase CelC, a member of the largest cellulase family (family A), has been determined at 2.15 A resolution. The protein folds into an (alpha/beta)8 barrel, with a deep active-site cleft generated by the insertion of a helical subdomain. The structure of the catalytic core of xylanase XynZ, which belongs to xylanase family F, has been determined at 1.4 A resolution. In spite of significant differences in substrate specificity and structure (including the absence of the helical subdomain), the general polypeptide folding pattern, architecture of the active site and catalytic mechanism of XynZ and CelC are similar, suggesting a common evolutionary origin.

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Year:  1995        PMID: 7664125     DOI: 10.1038/nsb0795-569

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  36 in total

1.  An additional aromatic interaction improves the thermostability and thermophilicity of a mesophilic family 11 xylanase: structural basis and molecular study.

Authors:  J Georis; F de Lemos Esteves; J Lamotte-Brasseur; V Bougnet; B Devreese; F Giannotta; B Granier; J M Frère
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

2.  Mapping glycoside hydrolase substrate subsites by isothermal titration calorimetry.

Authors:  Gennady Zolotnitsky; Uri Cogan; Noam Adir; Vered Solomon; Gil Shoham; Yuval Shoham
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-26       Impact factor: 11.205

3.  Modeling the self-assembly of the cellulosome enzyme complex.

Authors:  Yannick J Bomble; Gregg T Beckham; James F Matthews; Mark R Nimlos; Michael E Himmel; Michael F Crowley
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

4.  Sequence of xynC and properties of XynC, a major component of the Clostridium thermocellum cellulosome.

Authors:  H Hayashi; K I Takagi; M Fukumura; T Kimura; S Karita; K Sakka; K Ohmiya
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

5.  Crystallization and preliminary X-ray crystallographic studies of XynX, a family 10 xylanase from Aeromonas punctata ME-1.

Authors:  Zui Fujimoto; Kengo Usui; Yukari Kondo; Kazumasa Yasui; Keiichi Kawai; Tohru Suzuki
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-02-01

6.  Crystallization and preliminary crystallographic analysis of thermophilic cellulase from Fervidobacterium nodosum Rt17-B1.

Authors:  Baisong Zheng; Wen Yang; Yuguo Wang; Yan Feng; Zhiyong Lou
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-02-12

7.  Variations in the colchicine-binding domain provide insight into the structural switch of tubulin.

Authors:  Audrey Dorléans; Benoît Gigant; Raimond B G Ravelli; Patrick Mailliet; Vincent Mikol; Marcel Knossow
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-05       Impact factor: 11.205

8.  Domain assignment for protein structures using a consensus approach: characterization and analysis.

Authors:  S Jones; M Stewart; A Michie; M B Swindells; C Orengo; J M Thornton
Journal:  Protein Sci       Date:  1998-02       Impact factor: 6.725

9.  Purification, crystallization and crystallographic analysis of Clostridium thermocellum endo-1,4-beta-D-xylanase 10B in complex with xylohexaose.

Authors:  Shabir Najmudin; Benedita A Pinheiro; Maria J Romão; José A M Prates; Carlos M G A Fontes
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-07-05

10.  Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes.

Authors:  Peter J Turnbaugh; Bernard Henrissat; Jeffrey I Gordon
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-31
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