Literature DB >> 16511010

Crystallization and preliminary X-ray crystallographic studies of XynX, a family 10 xylanase from Aeromonas punctata ME-1.

Zui Fujimoto1, Kengo Usui, Yukari Kondo, Kazumasa Yasui, Keiichi Kawai, Tohru Suzuki.   

Abstract

Xylanases catalyze the hydrolysis of beta-1,4-glycosidic linkages within the xylan backbone. XynX is a xylanase from Aeromonas punctata ME-1 and belongs to glycoside hydrolase family 10. While most xylanases show endo-type catalytic activities, XynX shows exo-like catalytic activities, selectively producing xylobiose from birchwood xylan. In this study, XynX was crystallized by the hanging-drop vapour-diffusion method. The crystals belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 79.0, b = 88.6, c = 93.2 A, and diffracted to beyond 1.8 A resolution.

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Year:  2005        PMID: 16511010      PMCID: PMC1952265          DOI: 10.1107/S1744309105002058

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

2.  Purification and Characterization of Aeromonas caviae ME-1 Xylanase V, Which Produces Exclusively Xylobiose from Xylan.

Authors:  B K Kubata; T Suzuki; H Horitsu; K Kawai; K Takamizawa
Journal:  Appl Environ Microbiol       Date:  1994-02       Impact factor: 4.792

3.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  XynX, a possible exo-xylanase of Aeromonas caviae ME-1 that produces exclusively xylobiose and xylotetraose from xylan.

Authors:  K Usui; K Ibata; T Suzuki; K Kawai
Journal:  Biosci Biotechnol Biochem       Date:  1999-08       Impact factor: 2.043

5.  Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.

Authors:  A Schmidt; G M Gübitz; C Kratky
Journal:  Biochemistry       Date:  1999-02-23       Impact factor: 3.162

6.  Processing of XynE (110-kDa) of Aeromonas caviae ME-1 to 72-kDa xylanase in Escherichia coli transformant.

Authors:  Chen Jian Liu; Tohru Suzuki; Satoru Hirata; Keiichi Kawai
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

7.  A cytoplasmic xylanase (XynX) of Aeromonas caviae ME-1 is released from the cytoplasm to the periplasm by osmotic downshock.

Authors:  Kengo Usui; Tohru Suzuki; Toshitaka Akisaka; Keiichi Kawai
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

8.  The processing of high-molecular-weight xylanase (XynE, 110 kDa) from Aeromonas caviae ME-1 to 60-kDa xylanase (XynE60) in Escherichia coli and purification and characterization of XynE60.

Authors:  Chen Jian Liu; Tohru Suzuki; Satoru Hirata; Keiichi Kawai
Journal:  J Biosci Bioeng       Date:  2003       Impact factor: 2.894

9.  Xylanase IV, an Exoxylanase of Aeromonas caviae ME-1 Which Produces Xylotetraose as the Only Low-Molecular-Weight Oligosaccharide from Xylan.

Authors:  B K Kubata; K Takamizawa; K Kawai; T Suzuki; H Horitsu
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

10.  Structure determination of the extracellular xylanase from Geobacillus stearothermophilus by selenomethionyl MAD phasing.

Authors:  A Teplitsky; A Mechaly; V Stojanoff; G Sainz; G Golan; H Feinberg; R Gilboa; V Reiland; G Zolotnitsky; D Shallom; A Thompson; Y Shoham; G Shoham
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-04-21
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